Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03354 and RBAM_020700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_03354___qcrC.1.9828.seq
# -bsequence dna-align/RBAM_020700___qcrC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03354___qcrC-RBAM_020700___qcrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03354___qcrC-RBAM_020700___qcrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03354___qcrC
# 2: RBAM_020700___qcrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 770
# Identity: 632/770 (82.1%)
# Similarity: 632/770 (82.1%)
# Gaps: 4/770 ( 0.5%)
# Score: 2584.0
#
#
#=======================================
BSNT_03354___ 1 ATGCACCGGGGCAAAGGGATGAAATTTGTAGGCGACTCAAGGATACCGGC 50
|||||||||||.|||||.|||||.||||||||.||.||||||||||||||
RBAM_020700__ 1 ATGCACCGGGGGAAAGGAATGAAGTTTGTAGGAGATTCAAGGATACCGGC 50
BSNT_03354___ 51 TGAAAAAAAGCCGAATATACCGAAGGATTATTCGGAGTATCCCGGTAAAA 100
|||||||||.||||||||||||||.||.|||||.||||||||.||.||.|
RBAM_020700__ 51 TGAAAAAAAACCGAATATACCGAAAGACTATTCAGAGTATCCTGGAAAGA 100
BSNT_03354___ 101 CAGAGGCTTTCTGGCCAAATTTCTTGTTAAAGGAATGGATGGTTGGAGCT 150
|||||||.||.|||||.||.|||.||.|.||.|||||||||||.||.||.
RBAM_020700__ 101 CAGAGGCGTTTTGGCCGAACTTCCTGCTGAAAGAATGGATGGTCGGGGCC 150
BSNT_03354___ 151 GTCTTTCTCATCGGTTTTCTCGTTTTGACGATTGTGCATCAGCCGCCTTT 200
||.||.|||.||||.|||||||||||.|||||||||||..||||||||||
RBAM_020700__ 151 GTTTTCCTCGTCGGATTTCTCGTTTTAACGATTGTGCACGAGCCGCCTTT 200
BSNT_03354___ 201 GGAGCGGATGGCGGACCCGACTGATACTGGTTATATTCCGCTGCCGGATT 250
|||.|||.|||||||||||||.|||||.||.|||||||||||||||||||
RBAM_020700__ 201 GGAACGGGTGGCGGACCCGACGGATACAGGGTATATTCCGCTGCCGGATT 250
BSNT_03354___ 251 GGTATTTTCTTTTCTTATACCAGCTGTTGAAGTATGAATACGCCGCCGGA 300
||||||||||.||.|||||||||||.||.||.||||||||.|||||.||.
RBAM_020700__ 251 GGTATTTTCTATTTTTATACCAGCTATTAAAATATGAATATGCCGCAGGG 300
BSNT_03354___ 301 AGCTTTACAGTGGTCGGCGCCATGATTATGCCAGGTCTCGCTTTTGGGGC 350
||||..||.||..|||||||.||||||||.||.|||||.||.||.|||.|
RBAM_020700__ 301 AGCTACACCGTTATCGGCGCGATGATTATACCGGGTCTTGCCTTCGGGTC 350
BSNT_03354___ 351 CCTGCTTTTGGCTCCATTCCTAGACAGAGGGACAGAAAGAAGGCCGTGGA 400
.||||||||||||||.||.||.|||||.|||.|.||||||||||||||||
RBAM_020700__ 351 GCTGCTTTTGGCTCCGTTTCTCGACAGGGGGTCTGAAAGAAGGCCGTGGA 400
BSNT_03354___ 401 AGCGTCCGGTCGCTGTCGGTATGATGCTTCTGGCCATTTCCGCTGCTGTA 450
||||||||||.||.|||||.|||||||||.||||..|||.||||.|.||.
RBAM_020700__ 401 AGCGTCCGGTTGCGGTCGGCATGATGCTTTTGGCGCTTTGCGCTACGGTC 450
BSNT_03354___ 451 TTTTTGACGTGGCAGTCAGTTGCTACTCATGACTGGGCCAAGGCAGAAGA 500
|||||.||||||||||||||.||.||.|||||||||||.|||||.||.||
RBAM_020700__ 451 TTTTTAACGTGGCAGTCAGTCGCGACGCATGACTGGGCGAAGGCGGAGGA 500
BSNT_03354___ 501 ACAGGGGAAAATCACAAAAGAAGCCGACATTGACAC-CAATGCAGAAGGA 549
.||.||||||||||.|||||||||||.||||||.|| .||| ||||.||.
RBAM_020700__ 501 GCAAGGGAAAATCAAAAAAGAAGCCGCCATTGATACTGAAT-CAGACGGT 549
BSNT_03354___ 550 TATAAGGTCTTTAAGGAACAGGGCTGTATTTCTTGCCATGGGGATAACCT 599
||||||||.|||||.|||||.|||||||||||.||.||.||||||||.||
RBAM_020700__ 550 TATAAGGTATTTAAAGAACAAGGCTGTATTTCCTGTCACGGGGATAATCT 599
BSNT_03354___ 600 TCAGGGAGG-AGCGGCCGGGCCTTCATTGGTTGACAGCGGGCTGAAACCG 648
|||.||.|| ||| |||||.||.||..||||.||.|.||||||||..|||
RBAM_020700__ 600 TCAAGGCGGAAGC-GCCGGTCCGTCCCTGGTCGATAACGGGCTGAGCCCG 648
BSNT_03354___ 649 GATGAAATCAAAAAAATAGCTGTAGAAGGGAAAGGCAAAATGCCGGCGGG 698
||.|||||.||||||||.||.||..||||||||||..|.|||||.||.||
RBAM_020700__ 649 GAAGAAATTAAAAAAATCGCCGTCAAAGGGAAAGGGCAGATGCCAGCCGG 698
BSNT_03354___ 699 TGTGTTCAAAGGAAATGATAAGCAACTCGAAGAACTTGCAAAATTTATTT 748
|.|.||.|||||.|||||.||.||.||.||..|.||.||.||.||.||||
RBAM_020700__ 699 TATTTTTAAAGGGAATGACAAACAGCTTGATCAGCTGGCGAAGTTCATTT 748
BSNT_03354___ 749 CTGAAACAACCGCAAAATAA 768
|||||||.||.||.||||||
RBAM_020700__ 749 CTGAAACGACAGCGAAATAA 768
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