Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03353 and RBAM_020690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence pep-align/BSNT_03353___ypjA.1.9828.seq
# -bsequence pep-align/RBAM_020690___ypjA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03353___ypjA-RBAM_020690___ypjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03353___ypjA-RBAM_020690___ypjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03353___ypjA
# 2: RBAM_020690___ypjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 158/209 (75.6%)
# Similarity: 174/209 (83.3%)
# Gaps: 12/209 ( 5.7%)
# Score: 854.0
#
#
#=======================================
BSNT_03353___ 1 ------------MKWFQYVLGQRPMLILVLAINFLGTVYGYYWYLPQLLE 38
|:|..|:||.|.||:||||:||:|||||||||:|||.:
RBAM_020690__ 1 MIHTFYGLRVDGMRWISYLLGLRGMLLLVLAVNFIGTVYGYYWYVPQLAD 50
BSNT_03353___ 39 TPARFLIFVPDSPTATFFFLFVLLAFLMKRNAPLFEALALVTLVKYGLWA 88
||.|||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_020690__ 51 TPFRFLIFVPDSPTATFFFLFVLLAFLMGRNAPLFEALALVTLVKYGLWA 100
BSNT_03353___ 89 VAMNFLVLAVTGDLPWEGYMLIASHFAMAVQGVLYSPYFRFSFWHLAIAA 138
|.||..||...|.:|||||||||||||||||||||||||||...|||:||
RBAM_020690__ 101 VGMNVFVLVKMGQMPWEGYMLIASHFAMAVQGVLYSPYFRFRLRHLAVAA 150
BSNT_03353___ 139 VWTLHNDVIDYLFDMMPRYSMLSDYMTEIGYGTFWLSIFSIALAYFLVVS 188
|||||||||||||.||||||||:|||.||||.||||||||:.|||:||:|
RBAM_020690__ 151 VWTLHNDVIDYLFGMMPRYSMLNDYMQEIGYATFWLSIFSLGLAYYLVIS 200
BSNT_03353___ 189 KKQTKLELM 197
|::.||:|.
RBAM_020690__ 201 KRRIKLDLH 209
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