Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03350 and RBAM_020660

See DNA alignment / Visit BSNT_03350 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_03350.1.9828.seq
#    -bsequence pep-align/RBAM_020660___ypjC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03350-RBAM_020660___ypjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03350-RBAM_020660___ypjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03350
# 2: RBAM_020660___ypjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     266/290 (91.7%)
# Similarity:   284/290 (97.9%)
# Gaps:           0/290 ( 0.0%)
# Score: 1387.0
# 
#
#=======================================

BSNT_03350         1 MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFH     50
                     ||||||:|||.|||||||:|||||||||||||||||||||||||||||||
RBAM_020660__      1 MLGEIRIKNICFILIGAAVFSFGLVHFNMQNNLAEGGFTGITLLLYALFH     50

BSNT_03350        51 ISPSISNLVLNIPIFFIGWRLLGRTMFVYTLVGTVALSLFLSIFQRYEIH    100
                     ||||||||||||||||||||:||||||||||:|||:||:|||:|||||||
RBAM_020660__     51 ISPSISNLVLNIPIFFIGWRMLGRTMFVYTLIGTVSLSVFLSVFQRYEIH    100

BSNT_03350       101 MPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPM    150
                     |||.|||||||||||||||||||||||:|||||||||||||:||:|||||
RBAM_020660__    101 MPLSHDLALAALFAGVFIGAGLGIIFKYGGTTGGVDIIARLINKFFGIPM    150

BSNT_03350       151 GRTMFAFDACVIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAK    200
                     ||||||||||||:|||.|||||||||||||||||||||||||||||||||
RBAM_020660__    151 GRTMFAFDACVILLSLFTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAK    200

BSNT_03350       201 GATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDVLYCVVPKNEL    250
                     |||||||||||||:||:||||||||:|||||||||||.|||||||||||:
RBAM_020660__    201 GATIISSKNDLIQQKIIEEMERGVTVLKGQGSYTKEDRDVLYCVVPKNEI    250

BSNT_03350       251 VMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR    290
                     |:|||||.|:|||||||||||||||||||||||||||:.|
RBAM_020660__    251 VLLKSVITSVDPHAFVAVSDVHDVLGEGFTLDENKNPIRR    290


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