Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03347 and RBAM_020630

See DNA alignment / Visit BSNT_03347 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_03347___mgsA.1.9828.seq
#    -bsequence pep-align/RBAM_020630___mgsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03347___mgsA-RBAM_020630___mgsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03347___mgsA-RBAM_020630___mgsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03347___mgsA
# 2: RBAM_020630___mgsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:     124/137 (90.5%)
# Similarity:   132/137 (96.4%)
# Gaps:           0/137 ( 0.0%)
# Score: 639.0
# 
#
#=======================================

BSNT_03347___      1 MKIALIAHDKKKQDMVQFTTAYRDILKNHDLYATGTTGLKIQEATGLQIE     50
                     ||||||||||||||||||||||:|||.:|:|||||||||||||||||.:|
RBAM_020630__      1 MKIALIAHDKKKQDMVQFTTAYKDILSHHELYATGTTGLKIQEATGLSVE     50

BSNT_03347___     51 RFQSGPLGGDQQIGALIAANALDLVIFLRDPLTAQPHEPDVSALIRLCDV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020630__     51 RFQSGPLGGDQQIGALIAANALDLVIFLRDPLTAQPHEPDVSALIRLCDV    100

BSNT_03347___    101 YSIPLATNMGTAEILVRTLDEGVFEFRDLLRGEEPNV    137
                     |:||||||||||||||||||.|.|:||:|:||.||||
RBAM_020630__    101 YAIPLATNMGTAEILVRTLDGGAFDFRNLVRGGEPNV    137


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