Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03347 and RBAM_020630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_03347___mgsA.1.9828.seq
# -bsequence dna-align/RBAM_020630___mgsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03347___mgsA-RBAM_020630___mgsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03347___mgsA-RBAM_020630___mgsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03347___mgsA
# 2: RBAM_020630___mgsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 418
# Identity: 322/418 (77.0%)
# Similarity: 322/418 (77.0%)
# Gaps: 8/418 ( 1.9%)
# Score: 1235.0
#
#
#=======================================
BSNT_03347___ 1 ATGAAAATTGCTTTGATCGCGCATGACAAGAAAAAACAGGATATGGTTCA 50
||||||||.||||||||.||.||.||.||||||||.||||||||||||||
RBAM_020630__ 1 ATGAAAATCGCTTTGATTGCTCACGATAAGAAAAAGCAGGATATGGTTCA 50
BSNT_03347___ 51 ATTTACGACTGCCTATCGGGATATTTTAAAGAATCATGATCTATACGCAA 100
.||||||||.||.|||...|||||..|.|...||||.||..|||||||.|
RBAM_020630__ 51 GTTTACGACCGCATATAAAGATATACTGAGCCATCACGAGTTATACGCGA 100
BSNT_03347___ 101 CCGGAACCACAGGGTTGAAAATTCAAGAGGCGACAG----GTCTTCAAAT 146
|.||.||.|||||..|||||||.||.||.|||||.| |||| .|
RBAM_020630__ 101 CAGGTACGACAGGCCTGAAAATCCAGGAAGCGACCGGATTGTCT----GT 146
BSNT_03347___ 147 TGAACGTTTTCAATCCGGCCCTTTAGGGGGAGACCAGCAAATCGGTGCAC 196
|||||||||||||||||||||..|.||.|||||.|||||||||||.|||.
RBAM_020630__ 147 TGAACGTTTTCAATCCGGCCCGCTCGGCGGAGATCAGCAAATCGGCGCAT 196
BSNT_03347___ 197 TGATCGCTGCCAATGCACTCGATCTTGTCATTTTTTTGCGCGACCCGCTG 246
||||.||.||.|||||.||.|||||.|||||||||.|||||||.|||.|.
RBAM_020630__ 197 TGATTGCGGCAAATGCCCTGGATCTCGTCATTTTTCTGCGCGATCCGTTA 246
BSNT_03347___ 247 ACCGCGCAGCCGCATGAACCGGATGTCTCGGCATTAATCCGGTTATGTGA 296
||.||||||||.||.|||||||||||||||||..|.||||||.|.|||||
RBAM_020630__ 247 ACTGCGCAGCCTCACGAACCGGATGTCTCGGCGCTGATCCGGCTGTGTGA 296
BSNT_03347___ 297 TGTGTATTCCATTCCGCTCGCCACAAATATGGGTACTGCGGAAATTCTTG 346
.||.||..|.||.||||||||||||||||||||.||.||||||||.||.|
RBAM_020630__ 297 CGTATACGCGATCCCGCTCGCCACAAATATGGGGACAGCGGAAATCCTCG 346
BSNT_03347___ 347 TGCGCACACTTGATGAAGGTGTTTTCGAATTCCGTGACCTTCTTCGGGGA 396
|.||.||.||.||.|..||.|..||.||.|||||..|.|||.|.||.|||
RBAM_020630__ 347 TCCGGACGCTGGACGGCGGGGCATTTGATTTCCGCAATCTTGTGCGCGGA 396
BSNT_03347___ 397 GAAGAGCCGAATGTATAA 414
|.||||||||||||.|.|
RBAM_020630__ 397 GGAGAGCCGAATGTCTGA 414
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