Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03346 and RBAM_020620

See DNA alignment / Visit BSNT_03346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_03346___ypjG.1.9828.seq
#    -bsequence pep-align/RBAM_020620___ypjG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03346___ypjG-RBAM_020620___ypjG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03346___ypjG-RBAM_020620___ypjG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03346___ypjG
# 2: RBAM_020620___ypjG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     178/237 (75.1%)
# Similarity:   206/237 (86.9%)
# Gaps:           1/237 ( 0.4%)
# Score: 949.0
# 
#
#=======================================

BSNT_03346___      1 -MYNADVLAFGAHSDDVEIGMGGTIAKFVKQGKKVMICDLTEAELSSNGT     49
                      ..:.|:|||||||||||||||||||||..|||..:|||||:||||||||
RBAM_020620__      1 MSEHVDILAFGAHSDDVEIGMGGTIAKFTAQGKTAVICDLTQAELSSNGT     50

BSNT_03346___     50 VSLRKEEAAEAARILGADKRIQLTLPDRGLIMSDQAIRSIVTVIRTCRPK     99
                     |.:|||||||||||||..:|||||||||||:.|:..||.||:|||.||||
RBAM_020620__     51 VGIRKEEAAEAARILGVKERIQLTLPDRGLLKSEDGIRRIVSVIRACRPK    100

BSNT_03346___    100 AVFMPYKKDRHPDHGNAAALVEEAIFSAGIHKYKDEKSLPAHKVSKVYYY    149
                     .|||||.|||||||||||||||||:||||||||:|.:.|||||..:||||
RBAM_020620__    101 TVFMPYPKDRHPDHGNAAALVEEAVFSAGIHKYRDHQELPAHKAQRVYYY    150

BSNT_03346___    150 MINGFHQPDFVIDISDTIEAKKQSLNAYKSQFIPSKDSVSTPLTNGYIEI    199
                     ||||||:|||||||::||:.||:||:||:|||||:..||:|||||||||:
RBAM_020620__    151 MINGFHRPDFVIDITETIDLKKESLHAYQSQFIPTAQSVNTPLTNGYIEM    200

BSNT_03346___    200 VEAREKLYGKEAGVEYAEGFFSKRMLMLDHDVLGGEQ    236
                     |||||:|||||||..||||||||::.:|:.||.||.|
RBAM_020620__    201 VEARERLYGKEAGTGYAEGFFSKQLPVLNDDVFGGGQ    237


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