Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03345 and RBAM_020610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence pep-align/BSNT_03345___ypjH.1.9828.seq
# -bsequence pep-align/RBAM_020610___ypjH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03345___ypjH-RBAM_020610___ypjH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03345___ypjH-RBAM_020610___ypjH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03345___ypjH
# 2: RBAM_020610___ypjH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity: 327/377 (86.7%)
# Similarity: 353/377 (93.6%)
# Gaps: 0/377 ( 0.0%)
# Score: 1683.0
#
#
#=======================================
BSNT_03345___ 1 MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYH 50
||.|||||||||||||||||||||||.||||||::|||||||||||||||
RBAM_020610__ 1 MRPLKIGITCYPSVGGSGIIATELGKLLAEKGHQVHFITSSIPFRLNTYH 50
BSNT_03345___ 51 PNIHFHEVEVNQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHA 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_020610__ 51 PNIHFHEVEVNQYAVFKYPPYDLTLASKIAEVAARENLDIIHAHYALPHA 100
BSNT_03345___ 101 VCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTA 150
||||||||||||:||||||||||||||||||||||||||||||:||||||
RBAM_020610__ 101 VCAYLAKQMLKRDIGIVTTLHGTDITVLGYDPSLKDLIRFAIEASDRVTA 150
BSNT_03345___ 151 VSSALAAETYDLIKPEKKIETIYNFIDERVYLKKNTAVIKEKHGILPDEK 200
||:|||.||||||||:||||||||||||||||||||..||||||||||||
RBAM_020610__ 151 VSTALAGETYDLIKPDKKIETIYNFIDERVYLKKNTESIKEKHGILPDEK 200
BSNT_03345___ 201 VVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPEKSTACELIRK 250
||||||||||||||:||||||||||..||||||||||||||..|.:|:.|
RBAM_020610__ 201 VVIHVSNFRKVKRVKDVIRVFRNIAANTKAKLLLVGDGPEKCVAWQLVEK 250
BSNT_03345___ 251 YGLEDQVLMLGNQDRVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI 300
|||:||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_020610__ 251 YGLQDQVLLLGNQDRVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI 300
BSNT_03345___ 301 GTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAI 350
||||||||||||:.||||||:|||:.||:.:|:::|||.|||.|.|..|:
RBAM_020610__ 301 GTNIGGIPEVIKDQVSGFLVEVGDIQAASEKALAVLEDTQLSKRLTDHAL 350
BSNT_03345___ 351 EMLENEFSSKKIVSQYEQIYADLAEPE 377
:|:|..|||::||||||:||.:||.||
RBAM_020610__ 351 KMVETAFSSQRIVSQYERIYDELAGPE 377
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