Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03344 and RBAM_020600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence pep-align/BSNT_03344___cca.1.9828.seq
# -bsequence pep-align/RBAM_020600___cca.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03344___cca-RBAM_020600___cca.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03344___cca-RBAM_020600___cca.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03344___cca
# 2: RBAM_020600___cca
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 264/397 (66.5%)
# Similarity: 326/397 (82.1%)
# Gaps: 1/397 ( 0.3%)
# Score: 1374.0
#
#
#=======================================
BSNT_03344___ 1 MEKVFIKALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPD 50
||:.|:||||:|..|::|||||||||||||||||||.||||||||.|:|:
RBAM_020600__ 1 MEQEFVKALPILHHLMKAGHQAYFVGGAVRDSYMKRKIGDVDIATSASPN 50
BSNT_03344___ 51 QVERLFQRTVDVGKEHGTIIVLWEDETYEVTTFRTESDYVDFRRPSEVQF 100
:|||||:|||||||||||:|||||||||||||||.||:|.|:|||..|:|
RBAM_020600__ 51 EVERLFKRTVDVGKEHGTVIVLWEDETYEVTTFRAESEYKDYRRPEAVRF 100
BSNT_03344___ 101 ISSLEEDLKRRDLTINAMAMTADGKVLDYFGGKKDIDQKVIRTVGKPEDR 150
|:||.|||||||||||||||:|:|::||||||..||.||:|||||.||||
RBAM_020600__ 101 ITSLSEDLKRRDLTINAMAMSAEGELLDYFGGAHDIGQKLIRTVGNPEDR 150
BSNT_03344___ 151 FQEDALRMLRAVRFMSQLGFTLSPETEEAIAKEKSLLSHVSVERKTIEFE 200
|:||||||:|||||||||||.|..||.||:.|::.||:||||||||:|||
RBAM_020600__ 151 FREDALRMMRAVRFMSQLGFLLEKETREAVIKDRELLAHVSVERKTVEFE 200
BSNT_03344___ 201 KLLQGRASRQALQTLIQTRLYEELPGFYHKRENLISTSEFPFFSLTSREE 250
|||||.:|::|:||::||.|.:||||.....:.::..|.|||.||.:|||
RBAM_020600__ 201 KLLQGASSQEAIQTMVQTGLIQELPGLSGYEQQMLEASGFPFSSLDAREE 250
BSNT_03344___ 251 LWAALLINLGIVLKDAPLFLKGWKLPGKVIKEAIHIADTFGQSLDVMTMY 300
.|||||:.||:..|.|..|||.|||||||||:|:.|...:...|:...||
RBAM_020600__ 251 RWAALLLFLGLCPKSAEAFLKQWKLPGKVIKKAMQIISVYPAQLEAEAMY 300
BSNT_03344___ 301 RAGEKALLSAAKISQLRQNEKLDEKKLKDIQYAYQNLPIKSLKDLDITGK 350
|||| ||.||.||..|::::.:||:|||::|..|:.||||||:||||:|.
RBAM_020600__ 301 RAGE-ALFSAVKIGMLKKHKTIDEQKLKEVQSLYEQLPIKSLRDLDISGA 349
BSNT_03344___ 351 DLLALRNRPAGKWVSEELQRIEQAVVTGKLSNQKKHIEEWLKTCGQH 397
||:.||||.|||||:|||:|||:||:.|||.|:|..|:|||.:..||
RBAM_020600__ 350 DLMELRNRRAGKWVAEELRRIEEAVLAGKLPNRKHDIKEWLASWDQH 396
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