Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03341 and RBAM_020580

See DNA alignment / Visit BSNT_03341 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03341___panB.1.9828.seq
#    -bsequence pep-align/RBAM_020580___panB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03341___panB-RBAM_020580___panB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03341___panB-RBAM_020580___panB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: RBAM_020580___panB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     248/277 (89.5%)
# Similarity:   266/277 (96.0%)
# Gaps:           0/277 ( 0.0%)
# Score: 1281.0
# 
#
#=======================================

BSNT_03341___      1 MKTKLDFLKMKESEEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL     50
                     |||||||:||||:.||||||||||||.|||||||||||||||||||||||
RBAM_020580__      1 MKTKLDFVKMKENGEPIVMLTAYDYPQAKLAEQAGVDMILVGDSLGMVVL     50

BSNT_03341___     51 GLDSTVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAA    100
                     ||||||||||:|||||||||||||.|||||||||||||||||||||||||
RBAM_020580__     51 GLDSTVGVTVSDMIHHTKAVKRGAKNTFIVTDMPFMSYHLSKEDTLKNAA    100

BSNT_03341___    101 AIVQESGADALKLEGGEGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY    150
                     ||:|||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_020580__    101 AIIQESGADALKLEGGDGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY    150

BSNT_03341___    151 KVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIADTLSIPVI    200
                     |||||||||||||||||||||:|||||||||||||||||||.:.:|||||
RBAM_020580__    151 KVQGKDEQSAKKLIEDSIKCEQAGAMMLVLECVPAELTAKIKEEVSIPVI    200

BSNT_03341___    201 GIGAGVKADGQVLVYHDIIGHGVERTPKFVKQYTRIDETIETAISGYVQD    250
                     |||||.|||||||||||::||||:|||||||||.:||.|||:|:||||:|
RBAM_020580__    201 GIGAGSKADGQVLVYHDVVGHGVDRTPKFVKQYAKIDGTIESALSGYVRD    250

BSNT_03341___    251 VRHRAFPEQKHSFQMNQTVLDGLYGGK    277
                     |:.|.|||:|||||:|||||.||||||
RBAM_020580__    251 VKERVFPEEKHSFQINQTVLQGLYGGK    277


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