Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03341 and RBAM_020580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence pep-align/BSNT_03341___panB.1.9828.seq
# -bsequence pep-align/RBAM_020580___panB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03341___panB-RBAM_020580___panB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03341___panB-RBAM_020580___panB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: RBAM_020580___panB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity: 248/277 (89.5%)
# Similarity: 266/277 (96.0%)
# Gaps: 0/277 ( 0.0%)
# Score: 1281.0
#
#
#=======================================
BSNT_03341___ 1 MKTKLDFLKMKESEEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL 50
|||||||:||||:.||||||||||||.|||||||||||||||||||||||
RBAM_020580__ 1 MKTKLDFVKMKENGEPIVMLTAYDYPQAKLAEQAGVDMILVGDSLGMVVL 50
BSNT_03341___ 51 GLDSTVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAA 100
||||||||||:|||||||||||||.|||||||||||||||||||||||||
RBAM_020580__ 51 GLDSTVGVTVSDMIHHTKAVKRGAKNTFIVTDMPFMSYHLSKEDTLKNAA 100
BSNT_03341___ 101 AIVQESGADALKLEGGEGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY 150
||:|||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_020580__ 101 AIIQESGADALKLEGGDGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY 150
BSNT_03341___ 151 KVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIADTLSIPVI 200
|||||||||||||||||||||:|||||||||||||||||||.:.:|||||
RBAM_020580__ 151 KVQGKDEQSAKKLIEDSIKCEQAGAMMLVLECVPAELTAKIKEEVSIPVI 200
BSNT_03341___ 201 GIGAGVKADGQVLVYHDIIGHGVERTPKFVKQYTRIDETIETAISGYVQD 250
|||||.|||||||||||::||||:|||||||||.:||.|||:|:||||:|
RBAM_020580__ 201 GIGAGSKADGQVLVYHDVVGHGVDRTPKFVKQYAKIDGTIESALSGYVRD 250
BSNT_03341___ 251 VRHRAFPEQKHSFQMNQTVLDGLYGGK 277
|:.|.|||:|||||:|||||.||||||
RBAM_020580__ 251 VKERVFPEEKHSFQINQTVLQGLYGGK 277
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