Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03339 and RBAM_020570

See DNA alignment / Visit BSNT_03339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03339___panC.1.9828.seq
#    -bsequence pep-align/RBAM_020570___panC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03339___panC-RBAM_020570___panC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03339___panC-RBAM_020570___panC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03339___panC
# 2: RBAM_020570___panC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     214/286 (74.8%)
# Similarity:   239/286 (83.6%)
# Gaps:           0/286 ( 0.0%)
# Score: 1107.0
# 
#
#=======================================

BSNT_03339___      1 MRQITDITQLKEAIKQYHSEGKSIGFVPTMGFLHEGHLTLADKARQENDA     50
                     |:|:|:..||||.|.||.|||::|||||||||||||||||.:||.:|||.
RBAM_020570__      1 MKQLTETQQLKELIAQYRSEGRTIGFVPTMGFLHEGHLTLVEKASKENDI     50

BSNT_03339___     51 VIMSIFVNPAQFGPNEDFEAYPRDIERDAALAENAGVDILFTPDAHDMYP    100
                     |:|||||||.||||.||:||||||::|||.|||.||.|:||||...|||.
RBAM_020570__     51 VVMSIFVNPTQFGPGEDYEAYPRDLKRDARLAEQAGADVLFTPSPSDMYK    100

BSNT_03339___    101 GEKNVTIHVERRTDVLCGRSREGHFDGVAIVLTKLFNLVKPTRAYFGLKD    150
                     ||:||.:.|:||||||||.||.|||||||.||||.|||||||||||||||
RBAM_020570__    101 GEQNVAVQVKRRTDVLCGASRVGHFDGVATVLTKFFNLVKPTRAYFGLKD    150

BSNT_03339___    151 AQQVAVVDGLISDFFMDIELVPVDTVREEDGLAKSSRNVYLTAEERKEAP    200
                     |||.|||||||.|||||||||.||||||||||||||||||||.:||||||
RBAM_020570__    151 AQQAAVVDGLIEDFFMDIELVAVDTVREEDGLAKSSRNVYLTEQERKEAP    200

BSNT_03339___    201 KLYRALQTSAELIQAGERDPEAVIKAAKEIIETTSGTIDYVELYSYPELE    250
                     .:|:|||..||||:.|||:||.|||...:|||.|||.|||.|||:||||.
RBAM_020570__    201 MIYKALQQGAELIRDGERNPETVIKTVTDIIENTSGVIDYAELYAYPELT    250

BSNT_03339___    251 PVNEIAGKMILAVAVAFSKARLIDNIIIDIREMERI    286
                     |:..:.||:|||.||.||||||||||||||.|.||.
RBAM_020570__    251 PLKTLNGKVILACAVQFSKARLIDNIIIDIDEWERS    286


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