Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03338 and RBAM_020560

See DNA alignment / Visit BSNT_03338 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03338___panD.1.9828.seq
#    -bsequence pep-align/RBAM_020560___panD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03338___panD-RBAM_020560___panD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03338___panD-RBAM_020560___panD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03338___panD
# 2: RBAM_020560___panD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:     118/127 (92.9%)
# Similarity:   123/127 (96.9%)
# Gaps:           0/127 ( 0.0%)
# Score: 598.0
# 
#
#=======================================

BSNT_03338___      1 MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNN     50
                     ||||||:|||||||||||||||||||||||||:||||||.||||||||||
RBAM_020560__      1 MYRTMMAGKLHRATVTEANLNYVGSITIDEDLLDAVGMLANEKVQIVNNN     50

BSNT_03338___     51 NGARLETYIIPGKRGSGVICLNGAAARLVQEGDKVIIISYKMMSDQEAAS    100
                     ||||||||||||||||||||||||||||||||||||||||:|||||||.|
RBAM_020560__     51 NGARLETYIIPGKRGSGVICLNGAAARLVQEGDKVIIISYQMMSDQEAKS    100

BSNT_03338___    101 HEPKVAVLNDQNKIEQMLGNEPARTIL    127
                     |:||||||:||||||||||.|||.|||
RBAM_020560__    101 HQPKVAVLDDQNKIEQMLGQEPAHTIL    127


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