Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03338 and RBAM_020560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence dna-align/BSNT_03338___panD.1.9828.seq
# -bsequence dna-align/RBAM_020560___panD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03338___panD-RBAM_020560___panD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03338___panD-RBAM_020560___panD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03338___panD
# 2: RBAM_020560___panD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 312/384 (81.2%)
# Similarity: 312/384 (81.2%)
# Gaps: 0/384 ( 0.0%)
# Score: 1272.0
#
#
#=======================================
BSNT_03338___ 1 ATGTATCGAACAATGATGAGCGGCAAGCTTCACAGGGCAACTGTTACGGA 50
|||||.||.||.||||||..|||.||.||.|||.|.||.||.||.|||||
RBAM_020560__ 1 ATGTACCGCACTATGATGGCCGGAAAACTGCACCGCGCTACCGTGACGGA 50
BSNT_03338___ 51 AGCAAACCTGAACTATGTGGGAAGCATTACAATTGATGAAGATCTCATTG 100
|||.||..|.||||||||.||.||||||||.||||||||||||||..|.|
RBAM_020560__ 51 AGCCAATTTAAACTATGTCGGCAGCATTACGATTGATGAAGATCTTTTAG 100
BSNT_03338___ 101 ATGCTGTGGGAATGCTTCCTAATGAAAAAGTACAAATTGTGAATAATAAT 150
||||.||.||||||||..|||||||||||||.||.|||||||||||||||
RBAM_020560__ 101 ATGCCGTCGGAATGCTCGCTAATGAAAAAGTTCAGATTGTGAATAATAAT 150
BSNT_03338___ 151 AATGGAGCACGTCTTGAAACGTATATTATTCCTGGTAAACGGGGAAGCGG 200
||.|||||..|.||||||||||||||||||||.|||||.|||||.|||||
RBAM_020560__ 151 AACGGAGCGAGACTTGAAACGTATATTATTCCCGGTAAGCGGGGGAGCGG 200
BSNT_03338___ 201 CGTCATATGCTTAAACGGTGCAGCCGCACGCCTTGTGCAGGAAGGAGATA 250
||||||.||.||||||||.||||||||.||.||.||.||.||||||||||
RBAM_020560__ 201 CGTCATCTGTTTAAACGGAGCAGCCGCCCGTCTCGTCCAAGAAGGAGATA 250
BSNT_03338___ 251 AGGTCATTATTATTTCCTACAAAATGATGTCTGATCAAGAAGCGGCAAGC 300
|.||||||||||||||.||..||||||||||||||||.|||||...||||
RBAM_020560__ 251 AAGTCATTATTATTTCTTATCAAATGATGTCTGATCAGGAAGCAAAAAGC 300
BSNT_03338___ 301 CACGAGCCGAAAGTGGCTGTTCTGAATGATCAAAACAAAATTGAACAAAT 350
||..|||||||.|||||.||||||.|||||||.||.|||||.||.||.||
RBAM_020560__ 301 CATCAGCCGAAGGTGGCCGTTCTGGATGATCAGAATAAAATCGAGCAGAT 350
BSNT_03338___ 351 GCTGGGGAACGAACCAGCCCGTACAATTTTGTAG 384
||||||..|.||.||.||.|..||.||||||||.
RBAM_020560__ 351 GCTGGGCCAGGAGCCGGCACACACGATTTTGTAA 384
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