Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03337 and RBAM_020550

See DNA alignment / Visit BSNT_03337 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03337___dinG.1.9828.seq
#    -bsequence pep-align/RBAM_020550___dinG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03337___dinG-RBAM_020550___dinG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03337___dinG-RBAM_020550___dinG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03337___dinG
# 2: RBAM_020550___dinG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 931
# Identity:     672/931 (72.2%)
# Similarity:   795/931 (85.4%)
# Gaps:           3/931 ( 0.3%)
# Score: 3521.5
# 
#
#=======================================

BSNT_03337___      1 MNKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||::
RBAM_020550__      1 MNKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNQA     50

BSNT_03337___     51 IPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFV    100
                     ||.|||||||||:.|||||.||||||||:|.|||||||||||||||||||
RBAM_020550__     51 IPPFIEQLTGISSGMVENELPFEAVAEEIFHLLDGAYFVAHNIHFDLGFV    100

BSNT_03337___    101 KYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPH    150
                     ::||.:||::|||||||||||||||||||||||||.||..||.:.||:||
RBAM_020550__    101 RHELSEAGYELPDCEVLDTVELSRIVFPGFEGYKLGELCAELNIVHDRPH    150

BSNT_03337___    151 RADSDAEVTGLIFLEILEKLRQLPYPTLKQLRRLSQHFISDLTHLLDMFI    200
                     |||||||||||:||:||.||:.||.||||||||||||||||||.|||.||
RBAM_020550__    151 RADSDAEVTGLVFLDILHKLKHLPLPTLKQLRRLSQHFISDLTLLLDSFI    200

BSNT_03337___    201 NENRHTEIPGYTRFSSFSVREPEAIDVRINEDENFSFEIESWEAGNEKAL    250
                     :|:|..|......::|||::||:.|.|  :...|.:.::|.|....|:.|
RBAM_020550__    201 HESRPAEEKSCIPYASFSIKEPDHIPV--SRPVNAAIDLEKWNEEKEQIL    248

BSNT_03337___    251 SELMPGYEKRDGQMMMMREVADAFANREHALIEAPPGIGKTIGYLIPAAL    300
                     |.::|.||||.||:.||.||..||.|||||||||.||||||||||:||.|
RBAM_020550__    249 SGIIPRYEKRKGQLSMMDEVLGAFRNREHALIEAAPGIGKTIGYLVPAVL    298

BSNT_03337___    301 FAKKSKKPVIISTYSTLLQQQILTKDLPIVQDLFPFPVTAAILKGQSHYL    350
                     |||..:.|||||||||||||||::||||:::.:||:||.||||||:||||
RBAM_020550__    299 FAKAEQTPVIISTYSTLLQQQIMSKDLPLLERMFPWPVKAAILKGKSHYL    348

BSNT_03337___    351 CLYKFEQVLHEEDDNYDAVLTKAQLLVWLTETNTGDVAELNLPSGGKLLW    400
                     ||.|||.:||||||||||||||||||||||||.|||.|||||||||:|||
RBAM_020550__    349 CLPKFEHILHEEDDNYDAVLTKAQLLVWLTETETGDAAELNLPSGGRLLW    398

BSNT_03337___    401 DRLAYDDDSYKRSRSEHVIGFYERAKQIALRSDLVITNHSLLLTDEGSQK    450
                     :|:|||::|:.:...:...|||||||:.|..:||:||||:||.:|:.|:.
RBAM_020550__    399 ERMAYDENSFFKKGKDSAAGFYERAKEKAQAADLIITNHALLFSDQSSET    448

BSNT_03337___    451 KRLPESGTFIIDEAHHFERAASEHLGKRATYIELHTKLSRIGTLKEQGLL    500
                     |:||.|||.||||||||||||||||||||:||.|||||||||||||.|||
RBAM_020550__    449 KKLPASGTIIIDEAHHFERAASEHLGKRASYIGLHTKLSRIGTLKEHGLL    498

BSNT_03337___    501 KKMRQLFQRNSLPVDSFFELEEWLQHVQAESDAFFSSVHSFVKRRKPKED    550
                     |:||:||....||.:|||:.:||::|:|:|||||||||||||||||||:|
RBAM_020550__    499 KRMRKLFYTYELPAESFFDADEWMKHIQSESDAFFSSVHSFVKRRKPKDD    548

BSNT_03337___    551 LNRLVFKVNKESQDKSWSILTDGAERLCSMLTHLQQLFEAQSSLMEKHLK    600
                     |||||:.:|.:||||.:.::||||||||:||..|..:|..|..|:.:.|.
RBAM_020550__    549 LNRLVYSLNHKSQDKGFHMITDGAERLCAMLDQLLDMFSVQEKLLHQKLD    598

BSNT_03337___    601 GMKSKTVFLADEYQRSMKGLQHYCQTLQKLFFGSDDDEAVWIEIDAKGAK    650
                     .|||...|||.||.:.::||:.|..|..:|.|.:|:.||||:||||||||
RBAM_020550__    599 QMKSGAAFLAAEYVKCIRGLKEYRDTFSRLLFENDEKEAVWVEIDAKGAK    648

BSNT_03337___    651 NAVAIYAQPLEPGELLADQFFARKNSVVLTSATLTVEGSFQFMIERLGLS    700
                     |||:||||||||||:|||||||||.|||||||||.||.|||||||||||:
RBAM_020550__    649 NAVSIYAQPLEPGEMLADQFFARKKSVVLTSATLMVEHSFQFMIERLGLA    698

BSNT_03337___    701 DFFPRTMRIESPFSYDERMQVMIPKEMKSIQDTGQPEFIQDTARYIELMA    750
                     ||:|||..|.||||||::|.|:|||||||::..|:.|.|:..|:|.|:|:
RBAM_020550__    699 DFYPRTKSIPSPFSYDDQMNVIIPKEMKSVKYDGEREVIEHIAKYAEIMS    748

BSNT_03337___    751 KEKQPKILVLFTSHDMLKKVHQELKHNMSASGIQLLAQGITGGSPGKLMK    800
                     |.||||||||||||||||||:||||.:|..||||||||||:|||||||||
RBAM_020550__    749 KGKQPKILVLFTSHDMLKKVYQELKLSMEISGIQLLAQGISGGSPGKLMK    798

BSNT_03337___    801 TFKTSNQAILLGTNHFWEGVDFPGDELTTVMIVRLPFRSPDHPLHAAKCE    850
                     ||||:::||||||||||||||||||||:||||.|||||:||:||||||||
RBAM_020550__    799 TFKTASRAILLGTNHFWEGVDFPGDELSTVMIARLPFRAPDNPLHAAKCE    848

BSNT_03337___    851 LARKKGKNPFQTVSLPEAVLTFRQGIGRLLRSAGDKGTIMILDRRIKTAG    900
                     .|:|:|||||||:||||||||.|||||||||:|||||||::||:|:||||
RBAM_020550__    849 FAKKQGKNPFQTISLPEAVLTLRQGIGRLLRTAGDKGTIVLLDQRVKTAG    898

BSNT_03337___    901 YGRLFLDALPTTSVSEMTDSELEAYVAGEKE    931
                     ||||||:||||:|:.|:||:||.|||:..: 
RBAM_020550__    899 YGRLFLEALPTSSLLELTDAELGAYVSQTE-    928


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03337 and RBAM_020550

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
