Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03336 and RBAM_020540

See DNA alignment / Visit BSNT_03336 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03336___ypmA.1.9828.seq
#    -bsequence pep-align/RBAM_020540___ypmA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03336___ypmA-RBAM_020540___ypmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03336___ypmA-RBAM_020540___ypmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03336___ypmA
# 2: RBAM_020540___ypmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      54/56 (96.4%)
# Similarity:    56/56 (100.0%)
# Gaps:           0/56 ( 0.0%)
# Score: 273.0
# 
#
#=======================================

BSNT_03336___      1 MESKIEILSTINVEHSDDLYKIVDTLNRTLKRDNLMFGLALDEENKNQAV     50
                     |||||||||||||||||||||||||||||||||||||||||||||:|:||
RBAM_020540__      1 MESKIEILSTINVEHSDDLYKIVDTLNRTLKRDNLMFGLALDEENQNEAV     50

BSNT_03336___     51 FTIYRT     56
                     ||||||
RBAM_020540__     51 FTIYRT     56


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