Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03336 and RBAM_020540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence dna-align/BSNT_03336___ypmA.1.9828.seq
# -bsequence dna-align/RBAM_020540___ypmA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03336___ypmA-RBAM_020540___ypmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03336___ypmA-RBAM_020540___ypmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03336___ypmA
# 2: RBAM_020540___ypmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity: 142/171 (83.0%)
# Similarity: 142/171 (83.0%)
# Gaps: 0/171 ( 0.0%)
# Score: 594.0
#
#
#=======================================
BSNT_03336___ 1 ATGGAAAGTAAAATCGAAATTCTTTCAACAATTAATGTAGAGCATTCTGA 50
||||||||.|||||.||||||||.|||||.||||||||.||||||||.||
RBAM_020540__ 1 ATGGAAAGCAAAATTGAAATTCTGTCAACGATTAATGTGGAGCATTCAGA 50
BSNT_03336___ 51 TGATCTGTATAAAATTGTGGACACATTGAATCGTACACTGAAAAGAGACA 100
||||.|.||||||||.||.||.|||||.||.||.||..|||||.|.||||
RBAM_020540__ 51 TGATTTATATAAAATCGTCGATACATTAAACCGGACTTTGAAACGGGACA 100
BSNT_03336___ 101 ATCTGATGTTCGGCCTTGCGCTGGATGAAGAAAACAAAAACCAAGCCGTT 150
||||||||||||||||||||||.||.||||||||..||||..||||.||.
RBAM_020540__ 101 ATCTGATGTTCGGCCTTGCGCTCGACGAAGAAAATCAAAATGAAGCGGTC 150
BSNT_03336___ 151 TTTACCATTTATCGTACGTAG 171
||.|||||||||||.||.|||
RBAM_020540__ 151 TTCACCATTTATCGCACATAG 171
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