Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03331 and RBAM_020500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence pep-align/BSNT_03331___dnaD.1.9828.seq
# -bsequence pep-align/RBAM_020500___dnaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03331___dnaD-RBAM_020500___dnaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03331___dnaD-RBAM_020500___dnaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03331___dnaD
# 2: RBAM_020500___dnaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 205/232 (88.4%)
# Similarity: 215/232 (92.7%)
# Gaps: 0/232 ( 0.0%)
# Score: 1080.0
#
#
#=======================================
BSNT_03331___ 1 MKKQQFIDMQEQGTSTIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSY 50
|||||||||||.|.|:|||||||||:||||||||||||||||||||||||
RBAM_020500__ 1 MKKQQFIDMQELGISSIPNLLLTHYRQLGLNETELILLLKIKMHLEKGSY 50
BSNT_03331___ 51 FPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECEDQNGIKFEKYSLQ 100
||||.:||.|||||.||||:.|||||||||||||||||.|||||||||||
RBAM_020500__ 51 FPTPFELQSGMSISAEECTSCLRMFIQKGFLFIEECEDHNGIKFEKYSLQ 100
BSNT_03331___ 101 PLWGKLYEYIQLAQNQTQERKAEGEQKSLYTIFEEEFARPLSPLECETLA 150
|||.|||:|:|.:||:||||.:|.|||||||||||||.||||||||||||
RBAM_020500__ 101 PLWAKLYDYMQHSQNETQERTSEREQKSLYTIFEEEFGRPLSPLECETLA 150
BSNT_03331___ 151 IWQDQDQHDAQLIKHALKEAVLSGKLSFRYIDRILFEWKKNGLKTVEQAK 200
||||||||||.|||||||||||||||||||||||||||||||.|||||||
RBAM_020500__ 151 IWQDQDQHDAILIKHALKEAVLSGKLSFRYIDRILFEWKKNGFKTVEQAK 200
BSNT_03331___ 201 IHSQKFRRVQAKQNEPQKEYKRQVPFYNWLEQ 232
.|||||||||.|||:|||||.|||||||||||
RBAM_020500__ 201 AHSQKFRRVQTKQNDPQKEYTRQVPFYNWLEQ 232
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