Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03331 and RBAM_020500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03331___dnaD.1.9828.seq
# -bsequence dna-align/RBAM_020500___dnaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03331___dnaD-RBAM_020500___dnaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03331___dnaD-RBAM_020500___dnaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03331___dnaD
# 2: RBAM_020500___dnaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 700
# Identity: 573/700 (81.9%)
# Similarity: 573/700 (81.9%)
# Gaps: 2/700 ( 0.3%)
# Score: 2345.0
#
#
#=======================================
BSNT_03331___ 1 ATGAAAAAACAGCAATTTATTGATATGCAGGAGCAGGGAACATCAACCAT 50
||||||||||||||||||||.|||||||||||.|..||.|..||||.|||
RBAM_020500__ 1 ATGAAAAAACAGCAATTTATAGATATGCAGGAACTCGGCATTTCAAGCAT 50
BSNT_03331___ 51 CCCCAATCTTCTGCTTACGCATTATAAACAGCTTGGGCTTAATGAAACAG 100
.||.||.||.|||||.||.|||||....|||||||||||.||||||||.|
RBAM_020500__ 51 TCCAAACCTGCTGCTGACACATTACCGGCAGCTTGGGCTGAATGAAACCG 100
BSNT_03331___ 101 AACTTATTCTGCTGTTAAAAATTAAAATGCATTTAGAAAAAGGATCATAT 150
||.|.||.|||||.||.||.||||||||||||||.|||||.||.||.|||
RBAM_020500__ 101 AATTGATCCTGCTTTTGAAGATTAAAATGCATTTGGAAAAGGGCTCTTAT 150
BSNT_03331___ 151 TTTCCTACACCGAATCAGCTGCAGGAAGGTATGTCAATTTCTGTTGAAGA 200
|||||.||.|||..|.|.||.|||..|||.|||||.||.||||.||||||
RBAM_020500__ 151 TTTCCGACGCCGTTTGAACTTCAGTCAGGCATGTCCATCTCTGCTGAAGA 200
BSNT_03331___ 201 ATGCACAAACAGATTGCGGATGTTTATTCAAAAAGGCTTTCTGTTTATTG 250
|||.||||.|.|..||.|.|||||||||||||||||.|||||||||||||
RBAM_020500__ 201 ATGTACAAGCTGCCTGAGAATGTTTATTCAAAAAGGTTTTCTGTTTATTG 250
BSNT_03331___ 251 AAGAATGCGAGGATCAAAACGGCATCAAATTTGAGAAATATTCTCTTCAG 300
|||||||.||.||.||.||||||||.||.|||||.|||||||||||.|||
RBAM_020500__ 251 AAGAATGTGAAGACCATAACGGCATAAAGTTTGAAAAATATTCTCTGCAG 300
BSNT_03331___ 301 CCTTTATGGGGGAAGCTGTACGAATATATTCAGCTTGCACAGAATCAAAC 350
||.|||||||.|||||||||.||.||.||.||||.|.||||.||..||||
RBAM_020500__ 301 CCGTTATGGGCGAAGCTGTATGATTACATGCAGCATTCACAAAACGAAAC 350
BSNT_03331___ 351 ACAGGAAAGAAAAGCAGAAGGGGAACAAAAAAGCCTTTATACCATTTTTG 400
.||||||||||...|||||.|.||||||||||||||.||||||||.||||
RBAM_020500__ 351 GCAGGAAAGAACGTCAGAAAGAGAACAAAAAAGCCTGTATACCATCTTTG 400
BSNT_03331___ 401 AGGAAGAGTTCGCAAGGCCGTTATCGCCTTTGGAGTGTGAAACGCTGGCG 450
|.||||||||||.|||.|||.|.|||||..|.||.||.||.||||||||.
RBAM_020500__ 401 AAGAAGAGTTCGGAAGACCGCTGTCGCCGCTTGAATGCGAGACGCTGGCC 450
BSNT_03331___ 451 ATCTGGCAGGACCAGGATCAGCATGACGCACAACTGATCAAACACGCGTT 500
||.|||||||||||||||||||||||.||....|||||.||||||||.||
RBAM_020500__ 451 ATATGGCAGGACCAGGATCAGCATGATGCGATTCTGATTAAACACGCCTT 500
BSNT_03331___ 501 AAAAGAGGCTGTACTATCAGGAAAACTCAGTTTCCGCTACATTGACCGCA 550
||||||.||.||..||||.||||||||||||||.|||||.||||||||.|
RBAM_020500__ 501 AAAAGAAGCCGTTTTATCGGGAAAACTCAGTTTTCGCTATATTGACCGGA 550
BSNT_03331___ 551 TTTTGTTTGAATGGAAGAAAAACGGGCTT-AAAACTGTGGAGCAGGCAAA 599
||||.|||||||||||.||.||| ||||| |||||.||.||.|||||.||
RBAM_020500__ 551 TTTTATTTGAATGGAAAAAGAAC-GGCTTCAAAACGGTTGAACAGGCGAA 599
BSNT_03331___ 600 AATACACAGCCAAAAATTCCGGCGTGTACAAGCAAAGCAAAATGAACCGC 649
....|||||||||||||||||||||||.|||.||||.||||||||.||||
RBAM_020500__ 600 GGCGCACAGCCAAAAATTCCGGCGTGTTCAAACAAAACAAAATGATCCGC 649
BSNT_03331___ 650 AAAAAGAGTATAAAAGGCAGGTTCCTTTTTACAATTGGCTTGAACAATAA 699
||||||||||||..||||||||.|||||||||||||||||.|||||||||
RBAM_020500__ 650 AAAAAGAGTATACGAGGCAGGTGCCTTTTTACAATTGGCTGGAACAATAA 699
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