Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03329 and RBAM_020490

See DNA alignment / Visit BSNT_03329 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence pep-align/BSNT_03329___nth.1.9828.seq
#    -bsequence pep-align/RBAM_020490___nth.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03329___nth-RBAM_020490___nth.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03329___nth-RBAM_020490___nth.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: RBAM_020490___nth
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity:     211/219 (96.3%)
# Similarity:   216/219 (98.6%)
# Gaps:           0/219 ( 0.0%)
# Score: 1109.0
# 
#
#=======================================

BSNT_03329___      1 MLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNR     50
                     ||||||||:||:||||||||||||||||||||||||||||||||||||||
RBAM_020490__      1 MLNLKQIEYCLEKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNR     50

BSNT_03329___     51 VTKTLFQKYKRPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIED    100
                     ||||||||||||||||||.||||||||||||||||||||||||||||||:
RBAM_020490__     51 VTKTLFQKYKRPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEE    100

BSNT_03329___    101 YGGEVPRDRDELVKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLG    150
                     ||||||:||||||.||||||||||||||||||||||||||||||||||||
RBAM_020490__    101 YGGEVPKDRDELVNLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLG    150

BSNT_03329___    151 ICRWKDSVLEVEKTLMRKVPKEDWSVTHHRLIFFGRYHCKAQSPRCAECP    200
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_020490__    151 ICRWKDSVLEVEKTLMKKVPKEDWSVTHHRLIFFGRYHCKAQSPRCAECP    200

BSNT_03329___    201 LLSLCREGQKRDKKGLVKR    219
                     ||.||||||||||||||||
RBAM_020490__    201 LLPLCREGQKRDKKGLVKR    219


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.