Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03329 and RBAM_020490
See
DNA alignment /
Visit
BSNT_03329 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence pep-align/BSNT_03329___nth.1.9828.seq
# -bsequence pep-align/RBAM_020490___nth.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03329___nth-RBAM_020490___nth.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03329___nth-RBAM_020490___nth.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: RBAM_020490___nth
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 211/219 (96.3%)
# Similarity: 216/219 (98.6%)
# Gaps: 0/219 ( 0.0%)
# Score: 1109.0
#
#
#=======================================
BSNT_03329___ 1 MLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNR 50
||||||||:||:||||||||||||||||||||||||||||||||||||||
RBAM_020490__ 1 MLNLKQIEYCLEKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNR 50
BSNT_03329___ 51 VTKTLFQKYKRPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIED 100
||||||||||||||||||.||||||||||||||||||||||||||||||:
RBAM_020490__ 51 VTKTLFQKYKRPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEE 100
BSNT_03329___ 101 YGGEVPRDRDELVKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLG 150
||||||:||||||.||||||||||||||||||||||||||||||||||||
RBAM_020490__ 101 YGGEVPKDRDELVNLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLG 150
BSNT_03329___ 151 ICRWKDSVLEVEKTLMRKVPKEDWSVTHHRLIFFGRYHCKAQSPRCAECP 200
||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_020490__ 151 ICRWKDSVLEVEKTLMKKVPKEDWSVTHHRLIFFGRYHCKAQSPRCAECP 200
BSNT_03329___ 201 LLSLCREGQKRDKKGLVKR 219
||.||||||||||||||||
RBAM_020490__ 201 LLPLCREGQKRDKKGLVKR 219
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.