Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03329 and RBAM_020490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03329___nth.1.9828.seq
# -bsequence dna-align/RBAM_020490___nth.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03329___nth-RBAM_020490___nth.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03329___nth-RBAM_020490___nth.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: RBAM_020490___nth
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 660
# Identity: 535/660 (81.1%)
# Similarity: 535/660 (81.1%)
# Gaps: 0/660 ( 0.0%)
# Score: 2175.0
#
#
#=======================================
BSNT_03329___ 1 GTGTTAAATCTAAAACAAATTGAATTCTGTTTAGACAAGATAGGTGACAT 50
|||||||||.||||.||.|||||||..|||.|.||.||.||.||.||.||
RBAM_020490__ 1 GTGTTAAATTTAAAGCAGATTGAATATTGTCTTGAAAAAATCGGCGATAT 50
BSNT_03329___ 51 GTTTCCTCATGCGGAGTGTGAACTGGTTCATTCCAATCCTTTTGAATTAG 100
||||||.||.||.||.||||||||.||.|||||.||||||||.|||||.|
RBAM_020490__ 51 GTTTCCGCACGCAGAATGTGAACTTGTCCATTCAAATCCTTTCGAATTGG 100
BSNT_03329___ 101 TGGTGGCTGTTGCTTTATCTGCGCAATGTACAGATGCACTTGTAAACAGA 150
|.|||||.||.||.|||||.|||||||||||.|||||.||.||.||||||
RBAM_020490__ 101 TTGTGGCAGTCGCATTATCCGCGCAATGTACGGATGCTCTCGTCAACAGA 150
BSNT_03329___ 151 GTGACCAAAACATTATTCCAAAAATATAAACGGCCGGAAGACTATTTGGC 200
|||||.|||||..||||.|||||||||||||||||.|||||.|||.|.||
RBAM_020490__ 151 GTGACAAAAACGCTATTTCAAAAATATAAACGGCCCGAAGATTATCTTGC 200
BSNT_03329___ 201 TGTTCCGCTGGAAGAGCTTCAGCAGGATATTAAATCAATCGGTTTATATC 250
.||..||||||||||.||.|||||||||||||||||||||||..|.||.|
RBAM_020490__ 201 CGTATCGCTGGAAGAACTCCAGCAGGATATTAAATCAATCGGCCTGTACC 250
BSNT_03329___ 251 GTAATAAAGCGAAAAATATTCAAAAGCTGAGTAAAATGATTATTGAAGAT 300
||||||||||.||||||||||||||||||||.||||||||.||.|||||.
RBAM_020490__ 251 GTAATAAAGCCAAAAATATTCAAAAGCTGAGCAAAATGATCATCGAAGAG 300
BSNT_03329___ 301 TACGGCGGAGAAGTGCCGAGAGACCGCGATGAGCTTGTCAAACTGCCAGG 350
|||||||||||||||||||.||||||.|||||||||||.||.|||||.||
RBAM_020490__ 301 TACGGCGGAGAAGTGCCGAAAGACCGGGATGAGCTTGTGAATCTGCCGGG 350
BSNT_03329___ 351 GGTCGGGAGAAAGACCGCAAACGTAGTGGTATCCGTTGCGTTTGGCGTGC 400
.|||||..|.||.||.|||||.||.||.||.||.|||||.||.|||||.|
RBAM_020490__ 351 TGTCGGACGGAAAACGGCAAATGTGGTCGTGTCTGTTGCTTTCGGCGTAC 400
BSNT_03329___ 401 CGGCCATAGCCGTAGATACCCATGTGGAGAGAGTCAGCAAACGATTGGGC 450
|.||.||.||.|||||.||.|||||||||.|.|||...|||||..|.||.
RBAM_020490__ 401 CTGCGATTGCAGTAGACACTCATGTGGAGCGGGTCTCTAAACGGCTCGGT 450
BSNT_03329___ 451 ATTTGCCGGTGGAAGGACTCGGTTCTGGAAGTTGAAAAGACGCTGATGCG 500
||.|||||.|||||||||||.|||.|||||||.||.||.||..|.|||..
RBAM_020490__ 451 ATCTGCCGCTGGAAGGACTCTGTTTTGGAAGTAGAGAAAACATTAATGAA 500
BSNT_03329___ 501 CAAGGTTCCCAAAGAAGATTGGTCCGTTACGCATCACCGGCTTATTTTCT 550
.||.||.||.|||||.||||||||.||||||||||||.|..|.||.||.|
RBAM_020490__ 501 AAAAGTGCCGAAAGAGGATTGGTCTGTTACGCATCACAGATTAATATTTT 550
BSNT_03329___ 551 TCGGCAGATATCACTGTAAAGCCCAATCTCCGCGCTGTGCGGAGTGTCCG 600
|||||||.|||||.||||||||.||||||||.|||||||||||.|||||.
RBAM_020490__ 551 TCGGCAGGTATCATTGTAAAGCGCAATCTCCCCGCTGTGCGGAATGTCCT 600
BSNT_03329___ 601 CTGCTTTCTTTGTGCAGAGAAGGGCAGAAGAGGGATAAAAAAGGACTGGT 650
.|||||.|..||||||||||||||||||||.|.||.||||||||.|||||
RBAM_020490__ 601 TTGCTTCCGCTGTGCAGAGAAGGGCAGAAGCGTGACAAAAAAGGGCTGGT 650
BSNT_03329___ 651 GAAACGATGA 660
||||||.|||
RBAM_020490__ 651 GAAACGGTGA 660
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