Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03328 and RBAM_020480

See DNA alignment / Visit BSNT_03328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence pep-align/BSNT_03328.1.9828.seq
#    -bsequence pep-align/RBAM_020480___ypoC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03328-RBAM_020480___ypoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03328-RBAM_020480___ypoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03328
# 2: RBAM_020480___ypoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:      87/166 (52.4%)
# Similarity:   111/166 (66.9%)
# Gaps:          30/166 (18.1%)
# Score: 488.5
# 
#
#=======================================

BSNT_03328         1 ------------------------MKKTLQTNPVYFDFCTE--LQGDLPW     24
                                             :|..|:.:|:|.||..:  :|   ||
RBAM_020480__      1 MTAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQ---PW     47

BSNT_03328        25 EDSGKYVPLLFEVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHW     74
                     .:.|:|||.||::|::.|.:|||||||||||||||:|||||.||:|:.||
RBAM_020480__     48 RERGEYVPFLFQIWNETKETLLPVFQTRKSRCDQNDMLKGIACLIAAFHW     97

BSNT_03328        75 TAGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELI    124
                     ||||.|.||||..|..|.:||:|||||||:.|||.||||:|.|||||||:
RBAM_020480__     98 TAGERVTSLDWTVLETKHFPAEPINWAERMAFILTKPTQFHSFIQLDELM    147

BSNT_03328       125 TEMKKHFYKYHAMNR-    139
                     |||||.::||.|||: 
RBAM_020480__    148 TEMKKQYHKYEAMNKC    163


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