Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03325 and RBAM_020470

See DNA alignment / Visit BSNT_03325 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03325___ponA.1.9828.seq
#    -bsequence pep-align/RBAM_020470___ponA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03325___ponA-RBAM_020470___ponA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03325___ponA-RBAM_020470___ponA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03325___ponA
# 2: RBAM_020470___ponA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     670/930 (72.0%)
# Similarity:   757/930 (81.4%)
# Gaps:          59/930 ( 6.3%)
# Score: 3404.5
# 
#
#=======================================

BSNT_03325___      1 MSDQFNSREARRKANSKSSPSPKKGKKRKKGGLFKKTLFTLLILFVLGVV     50
                                                          :.:|:||||||:|
RBAM_020470__      1 -------------------------------------MLSLVILFVLGIV     13

BSNT_03325___     51 GGAVTFAVMVSDAPSLDESKLKTPYSSTIYDKNGKEIAEVGAEKRTYVSI    100
                     |||..|||:||.||||||:||||||||||||||||||||||.||||||.|
RBAM_020470__     14 GGAAAFAVLVSGAPSLDEAKLKTPYSSTIYDKNGKEIAEVGGEKRTYVPI     63

BSNT_03325___    101 DEIPDVVKEAFIATEDARFYEHHGIDPVRIGGALVANFKDGFGAEGGSTI    150
                     .:||||||||||||||||||:||||||:||||||||||.||||:||||||
RBAM_020470__     64 KDIPDVVKEAFIATEDARFYKHHGIDPIRIGGALVANFTDGFGSEGGSTI    113

BSNT_03325___    151 TQQVVKNSLLSHQKTLKRKVQEVWLSIQLERNYSKDEILEMYLNRIYFSP    200
                     ||||||||||:||||:|||.||||||:||||:||||||||||||||||||
RBAM_020470__    114 TQQVVKNSLLTHQKTIKRKAQEVWLSLQLERHYSKDEILEMYLNRIYFSP    163

BSNT_03325___    201 RAYGIGKAAEEFFGVTDLSKLTVEQAATLAGMPQSPTAYNPVKNPDKAEK    250
                     ||||:||||||||||.|||||||||||||||||||||.|||||||..:||
RBAM_020470__    164 RAYGVGKAAEEFFGVKDLSKLTVEQAATLAGMPQSPTGYNPVKNPKASEK    213

BSNT_03325___    251 RRNIVLSLMKKQGFISDSQYNKAKKVAVKDEGVVSQKEYEKASTNKYSAF    300
                     |||||||||:||||||:|.|.|||||::|||||||||||:|..|||||||
RBAM_020470__    214 RRNIVLSLMEKQGFISNSDYQKAKKVSMKDEGVVSQKEYDKKDTNKYSAF    263

BSNT_03325___    301 VEEVMKEID--EKSDVDPSADGLKIYTTLDTKAQDKLDELMDGDTVGFTE    348
                     ||||||||:  ||.||:.|.|||||||||||||||.||:||:||||||:|
RBAM_020470__    264 VEEVMKEIETKEKKDVNISTDGLKIYTTLDTKAQDYLDQLMNGDTVGFSE    313

BSNT_03325___    349 GMQGGVTLLDTKNGEVRAIGAGRNQPVGGFNYATQTKAQPGSTIKPILDY    398
                     |||||||||||.|||:||||.|||:..|||||||.|:.||||||||||||
RBAM_020470__    314 GMQGGVTLLDTTNGEIRAIGPGRNRTAGGFNYATDTQRQPGSTIKPILDY    363

BSNT_03325___    399 GPVIENKKWSTYEQIDDSAYTYSNGKPIRDWDRKYLGPISMRYALAQSRN    448
                     |||||||||||||||||||||||:|.||.|||.||...||||.|||.|||
RBAM_020470__    364 GPVIENKKWSTYEQIDDSAYTYSDGTPIHDWDNKYRNMISMREALADSRN    413

BSNT_03325___    449 IPALKAFQAVGKDTAVDFANGLGLGLTKDNVTEAYSIGGFGG-NDGVSPL    497
                     ||||||:||.|||.||||||.|||||.||:|||:|||||||. |.||||:
RBAM_020470__    414 IPALKAYQAAGKDNAVDFANDLGLGLNKDSVTESYSIGGFGADNPGVSPM    463

BSNT_03325___    498 TMAGAYSAFGNNGTYNEPHFVKSIEFNDGTKLDLTPKSKSAMSDYTAFMI    547
                     |||||||||||||||||||.|.|||||||||||||||.|||||||||||:
RBAM_020470__    464 TMAGAYSAFGNNGTYNEPHAVTSIEFNDGTKLDLTPKPKSAMSDYTAFMV    513

BSNT_03325___    548 TDMLKTAVKTGTGQLAQVPGVEVAGKTGTTNFDDNEVKRYNIASGGARDS    597
                     |||||:||::|||:|||||.||||||||||||...::::||||.||..||
RBAM_020470__    514 TDMLKSAVESGTGKLAQVPNVEVAGKTGTTNFTKGDIQKYNIAQGGVPDS    563

BSNT_03325___    598 WFVGYTPQYTAAVWTGM-GENEAGKKSLSAEEQKVAKRIFAQLIADVDDG    646
                     ||||||||||||||||: ..|:|||||||..:|:||||||.:||:.||||
RBAM_020470__    564 WFVGYTPQYTAAVWTGVESGNKAGKKSLSYADQQVAKRIFQKLISYVDDG    613

BSNT_03325___    647 SGSFEKPDSVVEATVEKGSNPAKLAGPNTPSDKKLTEYFVKGTAPSTVSK    696
                     .|||::|||||:.|||||||||.|||||||.|||:||||||||.|:.|||
RBAM_020470__    614 KGSFKQPDSVVKETVEKGSNPAALAGPNTPDDKKVTEYFVKGTQPTAVSK    663

BSNT_03325___    697 TYEKEEKEETAKLSGLNVKYDKDNQSLTLSWNYDGDATFAVKQSVDGGSY    746
                     ||.||:.:   |.:||.||||||.:||||||||||||||.||||||||||
RBAM_020470__    664 TYTKEKAD---KPTGLQVKYDKDKKSLTLSWNYDGDATFNVKQSVDGGSY    710

BSNT_03325___    747 SEIQNSSAKEAVISGVQPGSVYKFEVTAVSDDGKS-TASTSYEVPKAEDD    795
                     |:||||||||||:|.|.|||.|.|:|||.:||||| |||.|::|||.|:|
RBAM_020470__    711 SDIQNSSAKEAVVSDVTPGSTYSFQVTAENDDGKSDTASASFKVPKDEED    760

BSNT_03325___    796 EDKKDQQQTDDEKQDDEKTQDDTQTDDSQKDDGQTD----QDQTDDSTND    841
                     :..||:...|::|.|::|.:|.||||||..||.|||    .|||  .|:|
RBAM_020470__    761 DADKDKATDDEQKSDEDKDKDKTQTDDSNTDDNQTDTSDGSDQT--PTDD    808

BSNT_03325___    842 QDKKQDNTNTNPSDNNNQDQSNDNDNDNSNNQDT-SDGDSNSGKNDSTGS    890
                     .||.||.::.:.:|||||:|.. |..||:..||. ||.||:||.:.|...
RBAM_020470__    809 PDKNQDQSDKDQTDNNNQNQPG-NGTDNNGQQDNGSDNDSDSGSDGSNKP    857

BSNT_03325___    891 D---TNKNKTDTSN-KTQTNSSSIEKTN--    914
                     |   |:||:..:|| ..|:|||:|:...  
RBAM_020470__    858 DSGQTDKNQDSSSNINGQSNSSTIQSNPAH    887


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03325 and RBAM_020470

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
