Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03322 and RBAM_020450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence pep-align/BSNT_03322___yppC.1.9828.seq
# -bsequence pep-align/RBAM_020450___yppC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03322___yppC-RBAM_020450___yppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03322___yppC-RBAM_020450___yppC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03322___yppC
# 2: RBAM_020450___yppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 235/318 (73.9%)
# Similarity: 270/318 (84.9%)
# Gaps: 0/318 ( 0.0%)
# Score: 1284.0
#
#
#=======================================
BSNT_03322___ 1 MQEQQTIRKLLSRIERQTKIKNADNISRTNAYKAFYDRHPEIKWSLLASF 50
|.::||:..:|..||::|||||||||||||||||:|||||||||.|||||
RBAM_020450__ 1 MHKRQTVTAILRLIEKETKIKNADNISRTNAYKAYYDRHPEIKWPLLASF 50
BSNT_03322___ 51 VSRNAGWSMTDLKGSLFQLGLRERQQEWFFLAYERANWLIFSDAYPQLLL 100
||||||||||||:|.|:|.||...|:.||||:|||||||||||||||||:
RBAM_020450__ 51 VSRNAGWSMTDLRGVLYQEGLDSSQKNWFFLSYERANWLIFSDAYPQLLV 100
BSNT_03322___ 101 YHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINEQN 150
|.|||::|:|||..|..|.||.||.|||.|||.:.:||||||||||||||
RBAM_020450__ 101 YQWSKQIGEPLFRHLPYFRVSAFMQEEWFRFWRDGDTERLMYALIINEQN 150
BSNT_03322___ 151 TIQTPIIQNPSFKKNVFDTIPFYLSDWLHFNTVIFPSSNGFLYGISVKRF 200
|||.|||||||||||||.|||||||||.|||||||||.:|.|||||||||
RBAM_020450__ 151 TIQAPIIQNPSFKKNVFGTIPFYLSDWFHFNTVIFPSFDGHLYGISVKRF 200
BSNT_03322___ 201 SKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGSRFDMEKMIGITK 250
||.||||.|||||::|||.|:|.:|||.||.|||||||||||||||||.|
RBAM_020450__ 201 SKTEERITLGKQLARLLFSPDLHASFYRFLDTVPHTGSRFDMEKMIGIKK 250
BSNT_03322___ 251 RTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDWYL 300
||||||||.||.:.|.|||.:.|||..:::|..|.:|::|||:||||||.
RBAM_020450__ 251 RTSPMLRTTYPIVAHPLDGERADWFQKRLRKGAFLQEKMPKQLELTDWYF 300
BSNT_03322___ 301 HKKRQLHALFAVEQWLKK 318
.|:|:|||||||::||||
RBAM_020450__ 301 QKRRELHALFAVKEWLKK 318
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