Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03322 and RBAM_020450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03322___yppC.1.9828.seq
# -bsequence dna-align/RBAM_020450___yppC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03322___yppC-RBAM_020450___yppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03322___yppC-RBAM_020450___yppC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03322___yppC
# 2: RBAM_020450___yppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 986
# Identity: 738/986 (74.8%)
# Similarity: 738/986 (74.8%)
# Gaps: 58/986 ( 5.9%)
# Score: 2673.0
#
#
#=======================================
BSNT_03322___ 1 GTGCAAGAACAACAGACCATTAGAAAGC----TTCTGAGCCGGATTG--- 43
|||||..|||.||||||| |.||.| ||||..|||.|||.|
RBAM_020450__ 1 GTGCATAAACGACAGACC----GTAACCGCCATTCTTCGCCTGATCGAAA 46
BSNT_03322___ 44 -AGCGGCAGACAAAAATAAAAAACGCGGATAACATTTCAAGAACAAATGC 92
|| ||||.|||||||||||.||.|||||.|||||..|.||.|||||
RBAM_020450__ 47 AAG----AGACGAAAATAAAAAATGCCGATAATATTTCCCGGACGAATGC 92
BSNT_03322___ 93 TTATAAAGCATTTTACGACCGTCACCCGGAAATCAAATGGTCGCTTTTGG 142
.||||||||||.|||.|||||.||.||.||.|||||.|||.|||||||||
RBAM_020450__ 93 CTATAAAGCATATTATGACCGCCATCCTGAGATCAAGTGGCCGCTTTTGG 142
BSNT_03322___ 143 CTTCTTTCGTTTCTCGTAATGCCGGCTGGTCAATGACTGACTTAAAAGGC 192
|.||.||.||.||.||.|||||.||||||||.||||||||.||||.||||
RBAM_020450__ 143 CATCGTTTGTGTCCCGCAATGCGGGCTGGTCGATGACTGATTTAAGAGGC 192
BSNT_03322___ 193 AGT-CTGTTTCAGCTTGGACTCCGTGAGAGACAGCAAGAA----TGGTTC 237
|| ||.|.||||...|| ||.|||.|| |||..|||| |||||.
RBAM_020450__ 193 -GTCCTTTATCAGGAGGG---CCTTGACAG-CAGTCAGAAAAACTGGTTT 237
BSNT_03322___ 238 TT--TTTAGCCTATGAAAGAGCGAACTGGCTTATTTTTTCGGATGCCTAT 285
|| ||| |.||||||||.|||||.|||||.||||||||.|||||||||
RBAM_020450__ 238 TTCCTTT--CGTATGAAAGGGCGAATTGGCTGATTTTTTCTGATGCCTAT 285
BSNT_03322___ 286 CCGCAGCTTCTACTATACCACTGGTCAAAAAGAGTTGGGAAACCGCTGTT 335
||.||||||||..|.|||||.|||||||||..|.|.||..||||.||.||
RBAM_020450__ 286 CCTCAGCTTCTGGTCTACCAGTGGTCAAAACAAATCGGCGAACCTCTTTT 335
BSNT_03322___ 336 ---TCATCTGCTGCATGTGTTTGGCGTCTCACAATTTATGTCGGAAGAAT 382
||||||.|...|| ||..|||||||....||||||..||||||||
RBAM_020450__ 336 CCGTCATCTTCCTTAT---TTCCGCGTCTCGGCTTTTATGCAGGAAGAAT 382
BSNT_03322___ 383 GGACCCGTTTTTGGCATGAGCGAAATACGGAGCGGCTAATGTATGCCCTC 432
||..|||.|||||||.|||..||.|||||||.|||||.||||||||.||.
RBAM_020450__ 383 GGTTCCGCTTTTGGCGTGACGGAGATACGGAACGGCTCATGTATGCTCTT 432
BSNT_03322___ 433 ATTATAAATGAACAAAACACTATCCAAACACCTATTATACAAAATCCTTC 482
|||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_020450__ 433 ATTATAAATGAACAAAACACTATCCAAGCACCTATTATACAAAATCCTTC 482
BSNT_03322___ 483 GTTTAAAAAGAATGTTTTTGACACGATTCCTTTTTATTTAAGTGATTGGT 532
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_020450__ 483 GTTTAAAAAGAATGTTTTTGGCACGATTCCTTTTTATTTAAGTGATTGGT 532
BSNT_03322___ 533 TACATTTTAACACCGTTATTTTTCCTTCCTCAAATGGGTTTCTTTACGGC 582
|.||.|||||.||.||.||.||.|||||.|...|.||...|.|.|||||.
RBAM_020450__ 533 TTCACTTTAATACGGTGATATTCCCTTCATTTGACGGACATTTATACGGA 582
BSNT_03322___ 583 ATTTCAGTGAAACGCTTTTCAAAGGCGGAGGAAAGGATAAGGCTGGGAAA 632
|||||.||.|||||.||||||||..|.||.||.||.||.|.|||.|||||
RBAM_020450__ 583 ATTTCCGTCAAACGGTTTTCAAAAACCGAAGAGAGAATTACGCTCGGAAA 632
BSNT_03322___ 633 GCAGCTGTCTCAATTGCTGTTCAAGCCAGAATTGTT--CTCCTCTTTTTA 680
.||||||.|.|...|.|||||||..||.|| |.|| |.|.||||||||
RBAM_020450__ 633 ACAGCTGGCCCGCCTACTGTTCAGCCCTGA--TCTTCACGCTTCTTTTTA 680
BSNT_03322___ 681 TCACTTT-TTGCACACAGTGCCGCACACAGGTTCCCGTTTTGATATGGAA 729
.|..||| ||| |.||.||.||.||.||.|||||.||.|||||||||||.
RBAM_020450__ 681 CCGTTTTCTTG-ATACCGTTCCTCATACCGGTTCACGCTTTGATATGGAG 729
BSNT_03322___ 730 AAGATGATCGGGATTACAAAAAGAACATCTCCTATGCTAAGGACATGCTA 779
||.||||||||.||.|.||||||||||||.||.|||||.||||||..|||
RBAM_020450__ 730 AAAATGATCGGCATCAAAAAAAGAACATCACCGATGCTGAGGACAACCTA 779
BSNT_03322___ 780 -CCCTGAGTTAATCCACTCATTAGACGGAACGAAA--ACAGATTGGTTTC 826
|||...||| ..||||.|||||||||| ||||| .|.||||||||||
RBAM_020450__ 780 TCCCATTGTT-GCCCACCCATTAGACGG--CGAAAGGGCGGATTGGTTTC 826
BSNT_03322___ 827 ATGGAAAGATAAAGAAAACGTTCTTT-----AGGCGCGAGGAATTGCCGA 871
| ..||||.|.|||||||.|..|||| || |||.||.||||||
RBAM_020450__ 827 A-AAAAAGGTTAAGAAAAGGGGCTTTCTTACAG----GAGAAAATGCCGA 871
BSNT_03322___ 872 AGCAGATTGAATTGACAGACTGGTATTTACATAAAAAGCGCCAGCTTCAT 921
|.|||.|||||.||||.||||||||.||.||.||||..||..||||.|||
RBAM_020450__ 872 AACAGCTTGAACTGACGGACTGGTACTTCCAGAAAAGACGGGAGCTCCAT 921
BSNT_03322___ 922 GCGCTTTTTGCGGTGGAGCAGTGGCTGAAAAAATAA 957
|||||.||.|||||..|..||||||||||.||||.|
RBAM_020450__ 922 GCGCTCTTCGCGGTTAAAGAGTGGCTGAAGAAATGA 957
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