Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03321 and RBAM_020440

See DNA alignment / Visit BSNT_03321 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03321.1.9828.seq
#    -bsequence pep-align/RBAM_020440___sspM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03321-RBAM_020440___sspM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03321-RBAM_020440___sspM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03321
# 2: RBAM_020440___sspM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 44
# Identity:      27/44 (61.4%)
# Similarity:    31/44 (70.5%)
# Gaps:          10/44 (22.7%)
# Score: 146.0
# 
#
#=======================================

BSNT_03321         1 MQTILVRRCRMKTRPKKAGQQKKTESKAIDSLDKKLGGPNRPST     44
                               ||||||.||:|:|||:|..|:|||||||||||||
RBAM_020440__      1 ----------MKTRPKNAGKQQKTEAKTTDTLDKKLGGPNRPST     34


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