Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03319 and RBAM_020430

See DNA alignment / Visit BSNT_03319 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03319___yppD.1.9828.seq
#    -bsequence pep-align/RBAM_020430___yppD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03319___yppD-RBAM_020430___yppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03319___yppD-RBAM_020430___yppD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03319___yppD
# 2: RBAM_020430___yppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      33/81 (40.7%)
# Similarity:    51/81 (63.0%)
# Gaps:           0/81 ( 0.0%)
# Score: 162.0
# 
#
#=======================================

BSNT_03319___      1 MSGYVCKTDILRMLSDIEDELTRAEQSLNHSVNALEAEMRETENDRLSVL     50
                     ||.|..|.||||:|||||..::.||::|..:|.:.:||..|...::||.|
RBAM_020430__      1 MSVYTSKADILRLLSDIEFRISAAEKTLTQAVRSCQAEAEEIRQEKLSRL     50

BSNT_03319___     51 EEEIIDLHICINELYQSPEHRYAFEKVYRIG     81
                     |||..:||:||::|:.:...:....:..||.
RBAM_020430__     51 EEEARELHVCIDDLFLTDRRKKDLPRACRIS     81


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