Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03317 and RBAM_020420

See DNA alignment / Visit BSNT_03317 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03317___yppE.1.9828.seq
#    -bsequence pep-align/RBAM_020420___yppE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03317___yppE-RBAM_020420___yppE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03317___yppE-RBAM_020420___yppE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03317___yppE
# 2: RBAM_020420___yppE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      76/123 (61.8%)
# Similarity:    92/123 (74.8%)
# Gaps:           1/123 ( 0.8%)
# Score: 395.0
# 
#
#=======================================

BSNT_03317___      1 MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDEL     50
                     |.:|:|||:||||||...:...|||:||.|..||||||.|||.||:.|.|
RBAM_020420__      1 MQTQSLLELTEQMIEAVLEAEKRYQDGKESGRSYDFFEIIKPDVEKRDRL     50

BSNT_03317___     51 AARWAEGALELIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKKRFK    100
                     .|.|.|.||..|:..||||||..||:||.:||.||:||||||||||||::
RBAM_020420__     51 CALWTEAALAFIQENRPKYVHHAQIQAVTENFGELMLQSYVHHIHKKRYR    100

BSNT_03317___    101 DITESVLYTLHAVKDEIAREDSR    123
                     |:||||||||..::|||.:|.| 
RBAM_020420__    101 DLTESVLYTLRILRDEIEKEGS-    122


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