Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03316 and RBAM_020410

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_03316___yppF.1.9828.seq
#    -bsequence pep-align/RBAM_020410___yppF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03316___yppF-RBAM_020410___yppF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03316___yppF-RBAM_020410___yppF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03316___yppF
# 2: RBAM_020410___yppF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 62
# Identity:      52/62 (83.9%)
# Similarity:    57/62 (91.9%)
# Gaps:           2/62 ( 3.2%)
# Score: 274.0
# 
#
#=======================================

BSNT_03316___      1 MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLE     50
                     ||||||.|||||:|||||||.:|||||||||||||||:.|||||||||||
RBAM_020410__      1 MNVSYLRKRFAEVKKYETDCADKLMDFAKFLYIQGHLTATEFRNSMKVLE     50

BSNT_03316___     51 ANGAESPAYEMN     62
                     |:|||:||||  
RBAM_020410__     51 ASGAENPAYE--     60


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