Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03316 and RBAM_020410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03316___yppF.1.9828.seq
# -bsequence dna-align/RBAM_020410___yppF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03316___yppF-RBAM_020410___yppF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03316___yppF-RBAM_020410___yppF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03316___yppF
# 2: RBAM_020410___yppF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 160/189 (84.7%)
# Similarity: 160/189 (84.7%)
# Gaps: 6/189 ( 3.2%)
# Score: 698.0
#
#
#=======================================
BSNT_03316___ 1 ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGA 50
||||||||||||||||||||.||.||||||||.|||.||||.||||||||
RBAM_020410__ 1 ATGAACGTATCATACTTAAGAAAGCGTTTTGCTGAAGTGAAAAAATATGA 50
BSNT_03316___ 51 AACAGACTGTATGAATAAACTGATGGACTTTGCCAAGTTCCTCTATATTC 100
||||||.|||....|||||||||||||||||||.||.|||||||||||||
RBAM_020410__ 51 AACAGATTGTGCAGATAAACTGATGGACTTTGCAAAATTCCTCTATATTC 100
BSNT_03316___ 101 AAGGACATCTCAGCATAACTGAGTTTCGTAACAGTATGAAGGTTCTCGAA 150
||||.|||||||.|..|||.||.|||||.|||||||||||||||||||||
RBAM_020410__ 101 AAGGCCATCTCACCGCAACCGAATTTCGAAACAGTATGAAGGTTCTCGAA 150
BSNT_03316___ 151 GCAAATGGAGCAGAAAGCCCGGCATATGAGATGAATTAA 189
||||.|||||||||||.||||||.||||| ||.|
RBAM_020410__ 151 GCAAGTGGAGCAGAAAACCCGGCGTATGA-ATAA----- 183
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