Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03306 and RBAM_020360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_03306___yprB.1.9828.seq
# -bsequence pep-align/RBAM_020360___yprB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03306___yprB-RBAM_020360___yprB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03306___yprB-RBAM_020360___yprB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03306___yprB
# 2: RBAM_020360___yprB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity: 299/413 (72.4%)
# Similarity: 339/413 (82.1%)
# Gaps: 1/413 ( 0.2%)
# Score: 1574.0
#
#
#=======================================
BSNT_03306___ 1 MSLKGKLQRMKKHMALDEGEQKIEAGKQENHFDDIPFLEEWEAFGMKPFI 50
||||.||:|||.|:.:.|.|:|..|.:.......:||.|||||||:|||.
RBAM_020360__ 1 MSLKNKLKRMKNHLNVPEAEKKPAASQLSVPDIQVPFREEWEAFGVKPFF 50
BSNT_03306___ 51 FEDEYCLIREVEYPLSHRHGLYSFSELEEVITLWNQSGLSHTLSAKGYNK 100
||||||||||..||||||||.||||||::|:.|||:.||:|||||:||.|
RBAM_020360__ 51 FEDEYCLIRETVYPLSHRHGRYSFSELDDVMALWNKGGLTHTLSAEGYEK 100
BSNT_03306___ 101 NNLFFFDTETTGLGGGAGNTIFLLGHARVYEDRVTVKQHLLPKPGNEVAL 150
:.|||||||||||||||||.||||||||||||||.||||||||||||.||
RBAM_020360__ 101 SQLFFFDTETTGLGGGAGNMIFLLGHARVYEDRVAVKQHLLPKPGNETAL 150
BSNT_03306___ 151 YQSFLSEVDITSLVTYNGKAFDWPQVKTRHTLIRDRLPKLPEFGHFDLLH 200
|:||||||||||||||||||||||||||||||:||||||||:||||||||
RBAM_020360__ 151 YKSFLSEVDITSLVTYNGKAFDWPQVKTRHTLLRDRLPKLPDFGHFDLLH 200
BSNT_03306___ 201 GARRLWKHKMDRVSLGTVEKEELGIRRLEDTPGYLAPMLYFHFIKAQEPD 250
|||||||||::||||..||.|||..:|.|||||||||||||.|:||::|.
RBAM_020360__ 201 GARRLWKHKLERVSLSAVENEELAFKRDEDTPGYLAPMLYFQFLKAEDPA 250
BSNT_03306___ 251 LLKGVLHHNEMDVLSLISLYIHMSKKILSESHAPKEHSEAYAMAKWFMAH 300
||||||.|||.||||||:|||||||||.:.|....|..|||||||||:||
RBAM_020360__ 251 LLKGVLSHNEQDVLSLIALYIHMSKKIFASSDQTSERQEAYAMAKWFIAH 300
BSNT_03306___ 301 KETDQAMKQLERLIEKSFEDQDSARLDLSLLYKKQNRLEEAVPLWEKLSR 350
||||:|:.|||.|..|:|||.|.|..||::|||||||.::||||||||:.
RBAM_020360__ 301 KETDRAVSQLEALQGKAFEDSDRALFDLAMLYKKQNRRQDAVPLWEKLTG 350
BSNT_03306___ 351 SQNQKCRYAAVIELAKYFEHKKKKFGKALQIAEQLLSDAACLSEKETEKL 400
|....||:.:.:|||.||||..|.:.||||.|:|...|.. :||||.|||
RBAM_020360__ 351 SDLHICRHQSAVELAIYFEHHAKDYKKALQAAQQAAEDGE-ISEKEAEKL 399
BSNT_03306___ 401 HVRIARLKRKYSS 413
|||||||||||||
RBAM_020360__ 400 HVRIARLKRKYSS 412
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