Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03306 and RBAM_020360

See DNA alignment / Visit BSNT_03306 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_03306___yprB.1.9828.seq
#    -bsequence pep-align/RBAM_020360___yprB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03306___yprB-RBAM_020360___yprB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03306___yprB-RBAM_020360___yprB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03306___yprB
# 2: RBAM_020360___yprB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity:     299/413 (72.4%)
# Similarity:   339/413 (82.1%)
# Gaps:           1/413 ( 0.2%)
# Score: 1574.0
# 
#
#=======================================

BSNT_03306___      1 MSLKGKLQRMKKHMALDEGEQKIEAGKQENHFDDIPFLEEWEAFGMKPFI     50
                     ||||.||:|||.|:.:.|.|:|..|.:.......:||.|||||||:|||.
RBAM_020360__      1 MSLKNKLKRMKNHLNVPEAEKKPAASQLSVPDIQVPFREEWEAFGVKPFF     50

BSNT_03306___     51 FEDEYCLIREVEYPLSHRHGLYSFSELEEVITLWNQSGLSHTLSAKGYNK    100
                     ||||||||||..||||||||.||||||::|:.|||:.||:|||||:||.|
RBAM_020360__     51 FEDEYCLIRETVYPLSHRHGRYSFSELDDVMALWNKGGLTHTLSAEGYEK    100

BSNT_03306___    101 NNLFFFDTETTGLGGGAGNTIFLLGHARVYEDRVTVKQHLLPKPGNEVAL    150
                     :.|||||||||||||||||.||||||||||||||.||||||||||||.||
RBAM_020360__    101 SQLFFFDTETTGLGGGAGNMIFLLGHARVYEDRVAVKQHLLPKPGNETAL    150

BSNT_03306___    151 YQSFLSEVDITSLVTYNGKAFDWPQVKTRHTLIRDRLPKLPEFGHFDLLH    200
                     |:||||||||||||||||||||||||||||||:||||||||:||||||||
RBAM_020360__    151 YKSFLSEVDITSLVTYNGKAFDWPQVKTRHTLLRDRLPKLPDFGHFDLLH    200

BSNT_03306___    201 GARRLWKHKMDRVSLGTVEKEELGIRRLEDTPGYLAPMLYFHFIKAQEPD    250
                     |||||||||::||||..||.|||..:|.|||||||||||||.|:||::|.
RBAM_020360__    201 GARRLWKHKLERVSLSAVENEELAFKRDEDTPGYLAPMLYFQFLKAEDPA    250

BSNT_03306___    251 LLKGVLHHNEMDVLSLISLYIHMSKKILSESHAPKEHSEAYAMAKWFMAH    300
                     ||||||.|||.||||||:|||||||||.:.|....|..|||||||||:||
RBAM_020360__    251 LLKGVLSHNEQDVLSLIALYIHMSKKIFASSDQTSERQEAYAMAKWFIAH    300

BSNT_03306___    301 KETDQAMKQLERLIEKSFEDQDSARLDLSLLYKKQNRLEEAVPLWEKLSR    350
                     ||||:|:.|||.|..|:|||.|.|..||::|||||||.::||||||||:.
RBAM_020360__    301 KETDRAVSQLEALQGKAFEDSDRALFDLAMLYKKQNRRQDAVPLWEKLTG    350

BSNT_03306___    351 SQNQKCRYAAVIELAKYFEHKKKKFGKALQIAEQLLSDAACLSEKETEKL    400
                     |....||:.:.:|||.||||..|.:.||||.|:|...|.. :||||.|||
RBAM_020360__    351 SDLHICRHQSAVELAIYFEHHAKDYKKALQAAQQAAEDGE-ISEKEAEKL    399

BSNT_03306___    401 HVRIARLKRKYSS    413
                     |||||||||||||
RBAM_020360__    400 HVRIARLKRKYSS    412


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