Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03303 and RBAM_020340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_03303.1.9828.seq
# -bsequence pep-align/RBAM_020340___ypsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03303-RBAM_020340___ypsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03303-RBAM_020340___ypsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03303
# 2: RBAM_020340___ypsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 148/211 (70.1%)
# Similarity: 160/211 (75.8%)
# Gaps: 30/211 (14.2%)
# Score: 780.0
#
#
#=======================================
BSNT_03303 1 MENVQLDGVNNAAQQMGPTGAPFFKAGEMMKVLAITGYKPFELGIFKQDD 50
|||||:|||||||||||||||
RBAM_020340__ 1 -----------------------------MKVLAVTGYKPFELGIFKQDD 21
BSNT_03303 51 KALYYIKKAIKNRLIAFLDEGLEWILISGQLGVELWAAEVAYDLQEEYPD 100
:||.||||||:.||.:|:||||||||||||||.||||||.||||:||||:
RBAM_020340__ 22 QALVYIKKAIETRLRSFIDEGLEWILISGQLGTELWAAETAYDLREEYPE 71
BSNT_03303 101 LKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQ 150
||||||||||.||:.|||||||.|||||||||||.|||||||||||||:|
RBAM_020340__ 72 LKVAVITPFYGQEEKWKEPNKEMYEAVLAQADYEESLTHRPYESPLQFRQ 121
BSNT_03303 151 KNQFFIDKSDGLLLLYDLEKEGSPKYMLGSAEKRREQDGYPIYFITMDDL 200
||.|||:|||.||||||.|.||||||||..||||||.||||||.||||||
RBAM_020340__ 122 KNAFFIEKSDALLLLYDPEMEGSPKYMLQQAEKRRETDGYPIYSITMDDL 171
BSNT_03303 201 RVTVEEDSYS- 210
|..|||:.:.
RBAM_020340__ 172 RAAVEEEDFFT 182
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