Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03302 and RBAM_020330

See DNA alignment / Visit BSNT_03302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_03302___ypsB.1.9828.seq
#    -bsequence pep-align/RBAM_020330___ypsB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03302___ypsB-RBAM_020330___ypsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03302___ypsB-RBAM_020330___ypsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03302___ypsB
# 2: RBAM_020330___ypsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      96/99 (97.0%)
# Similarity:    98/99 (99.0%)
# Gaps:           1/99 ( 1.0%)
# Score: 487.0
# 
#
#=======================================

BSNT_03302___      1 MLADKVKLSAKEILEKEFKTGVRGYKQEDVDKFLDMIIKDYETFHQEIEE     50
                     |||||||||||:|||||||||||||:||||||||||||||||||||||||
RBAM_020330__      1 MLADKVKLSAKDILEKEFKTGVRGYRQEDVDKFLDMIIKDYETFHQEIEE     50

BSNT_03302___     51 LQQENLQLKKQLEEASKKQPVQSNTTNFDILKRLSNLEKHVFGSKLYD-     98
                     |||||||||||||||||||||||||||||||||||||||||||||||| 
RBAM_020330__     51 LQQENLQLKKQLEEASKKQPVQSNTTNFDILKRLSNLEKHVFGSKLYDE     99


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