Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03299 and RBAM_020280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_03299___ypvA.1.9828.seq
# -bsequence pep-align/RBAM_020280___ypvA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03299___ypvA-RBAM_020280___ypvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03299___ypvA-RBAM_020280___ypvA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03299___ypvA
# 2: RBAM_020280___ypvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity: 577/641 (90.0%)
# Similarity: 618/641 (96.4%)
# Gaps: 2/641 ( 0.3%)
# Score: 3042.5
#
#
#=======================================
BSNT_03299___ 1 MTTSRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQL 50
||||||||:|||.|||||||||||||||||||||||||||||||||||||
RBAM_020280__ 1 MTTSRLPFALTKEKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQL 50
BSNT_03299___ 51 ERAFKEKKVMFAEAGVGTGKTLVYLLFAISYARYVGKPAIIACADETLIE 100
||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_020280__ 51 ERAFKEKKVMFAEAGVGTGKTLVYLLFAISYARYTGKPAIIACADETLIE 100
BSNT_03299___ 101 QLVKKEGDISKLAEHLDLKIDTRLSKSHEQYLCLKKLEKTMQRSDDDKWL 150
||||||||||||.|||||:|||||||||||||||||||||||||||:|||
RBAM_020280__ 101 QLVKKEGDISKLTEHLDLQIDTRLSKSHEQYLCLKKLEKTMQRSDDEKWL 150
BSNT_03299___ 151 DLYESLPSFVHESQAMQRFYPYGDRKQYANLSNEEWSDVSYDSFQDCLTC 200
|||||||||||||||||||||||||||||:|:||||:.||||||||||||
RBAM_020280__ 151 DLYESLPSFVHESQAMQRFYPYGDRKQYADLTNEEWAGVSYDSFQDCLTC 200
BSNT_03299___ 201 DMRHRCGLTLSRDYYRKSTDLIICSHDFYMEHVWTEESRKREGQLPLLPD 250
|||||||||||||:||||||||:|||||||||||||||||||||||||||
RBAM_020280__ 201 DMRHRCGLTLSRDHYRKSTDLIVCSHDFYMEHVWTEESRKREGQLPLLPD 250
BSNT_03299___ 251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020280__ 251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE 300
BSNT_03299___ 301 DALLANDEFFYVLSEESKEVAGSHRLEIKNDQRVKKAADELCRLLDKIGE 350
|||.|||||||||||||||:||||||:|:||||||:||||||||||||||
RBAM_020280__ 301 DALAANDEFFYVLSEESKEIAGSHRLDIQNDQRVKRAADELCRLLDKIGE 350
BSNT_03299___ 351 ALVFESEMYTIDQYELSVVEEYVEQMAYSLSLYQKDAISWLEKKEAESTF 400
||||||||||||:|||||||||||||||||||||||||||||.::.:|||
RBAM_020280__ 351 ALVFESEMYTIDKYELSVVEEYVEQMAYSLSLYQKDAISWLETRDTDSTF 400
BSNT_03299___ 401 VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIHDYLSL 450
||||||||||||||||||||||||||||||||||||||||||||.|.||.
RBAM_020280__ 401 VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIRDPLSF 450
BSNT_03299___ 451 TVDSPYDYDEQMSINLYAKTDMAAEQKTAETIETIKRYKGRTLVLFPSFE 500
||:|||||:||||:.|:. ||.:||||||||||||:.:|||||||||||
RBAM_020280__ 451 TVESPYDYEEQMSVALHG--DMTSEQKTAETIETIKKNEGRTLVLFPSFE 498
BSNT_03299___ 501 ELNEFKELSAAWELPYPIFFEGDEEISSLVEKFQEEEETVLCSVHLWEGL 550
::.||||.:|||||||||::||||||||||||||.:||:|||||||||||
RBAM_020280__ 499 DMKEFKEQAAAWELPYPIYYEGDEEISSLVEKFQRDEESVLCSVHLWEGL 548
BSNT_03299___ 551 DIPGDALKNVTIWSLPFPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQ 600
|||||:|:|||||:||:|||||||||||||||||||||||||||||||||
RBAM_020280__ 549 DIPGDSLRNVTIWALPYPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQ 598
BSNT_03299___ 601 GIGRLIRSNQDSGSIHIYAGGENERIIDEVKKVLPVEPHMM 641
|||||||||||||:|.||||||:||::.||||:|||.|.::
RBAM_020280__ 599 GIGRLIRSNQDSGTISIYAGGESERVLAEVKKILPVTPKIV 639
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