Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03290 and RBAM_020270

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03290___ypwA.1.9828.seq
#    -bsequence pep-align/RBAM_020270___ypwA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03290___ypwA-RBAM_020270___ypwA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03290___ypwA-RBAM_020270___ypwA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03290___ypwA
# 2: RBAM_020270___ypwA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity:     410/501 (81.8%)
# Similarity:   462/501 (92.2%)
# Gaps:           1/501 ( 0.2%)
# Score: 2254.0
# 
#
#=======================================

BSNT_03290___      1 MEIHTYEKEFFDLLKRISHYSEAVALMHWDSRTGAPKNGSEDRAESIGQL     50
                     |::|||||||||||||:|||.||:||||||.||||||.||:|||||||||
RBAM_020270__      1 MDLHTYEKEFFDLLKRVSHYVEAIALMHWDLRTGAPKKGSDDRAESIGQL     50

BSNT_03290___     51 STDIFNIQTSDRMKELIDVLYERFDDLSEDTKKAVELAKKEYEENKKIPE    100
                     |.|:|.||||||||||||:|....::|.|||.||.|||||:|:.||||||
RBAM_020270__     51 SADVFQIQTSDRMKELIDILLAHAEELPEDTVKAAELAKKDYDHNKKIPE    100

BSNT_03290___    101 AEYKEYVILCSKAETAWEEAKGKSDFSLFSPYLEQLIEFNKRFITYWGYQ    150
                     .||||||||.||||||||:||..||||:|:||||:||:||||||:||||:
RBAM_020270__    101 DEYKEYVILTSKAETAWEDAKAASDFSMFAPYLEKLIDFNKRFISYWGYE    150

BSNT_03290___    151 EHPYDALLDLFEPGVTVKVLDQLFTELKEAVIPLVKQVTASGNKPDTSFL    200
                     :|||:||||:||||||||||||||:|||||:|||:|:||.|||||||||:
RBAM_020270__    151 DHPYNALLDIFEPGVTVKVLDQLFSELKEAIIPLIKKVTESGNKPDTSFI    200

BSNT_03290___    201 TKAFPKEKQKELSLYFLQELGYDFDGGRLDETVHPFATTLNRGDVRVTTR    250
                     ||.|.||:|:.||||||:|.|||||||||||||||||||:||||||||||
RBAM_020270__    201 TKTFSKEQQRALSLYFLKEFGYDFDGGRLDETVHPFATTINRGDVRVTTR    250

BSNT_03290___    251 YDEKDFRTAIFGTIHECGHAIYEQNIDEALSGTNLSDGASMGIHESQSLF    300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020270__    251 YDENDFRTAIFGTIHECGHAIYEQNIDEALSGTNLSDGASMGIHESQSLF    300

BSNT_03290___    301 YENFIGRNKHFWTPYYQKIQEASPEQFKDISLDDFVRAINESKPSFIRVE    350
                     |||||.||:||||.||:|:.||||:||:|:..:|||||:||:||:|||:|
RBAM_020270__    301 YENFIARNQHFWTAYYEKMVEASPDQFQDVKREDFVRAVNEAKPTFIRIE    350

BSNT_03290___    351 ADELTYPLHIIIRYEIEKAIFSNEVSVEDLPSLWNQKYQDYLGITPQTDA    400
                     |||||||||||||||||||||||||:||:||:||||||.|||||||.:||
RBAM_020270__    351 ADELTYPLHIIIRYEIEKAIFSNEVTVEELPALWNQKYHDYLGITPPSDA    400

BSNT_03290___    401 EGILQDVHWAGGDFGYFPSYALGYMYAAQLKQKMLEDLPEFDALLERGEF    450
                     :||||||||||||||||||||||||||||||..||:||||||.|:|||:|
RBAM_020270__    401 KGILQDVHWAGGDFGYFPSYALGYMYAAQLKHTMLDDLPEFDQLIERGDF    450

BSNT_03290___    451 HPIKQWLTEKVHIHGKRKKPLDIIKDATGEELNVRYLIDYLSNKYSNLYL    500
                     .|||||||||||.||:||.|||||||||||||||:|||:||..|||||||
RBAM_020270__    451 EPIKQWLTEKVHQHGRRKMPLDIIKDATGEELNVQYLIEYLVGKYSNLYL    500

BSNT_03290___    501 S    501
                      
RBAM_020270__    500 -    500


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