Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03288 and RBAM_020250

See DNA alignment / Visit BSNT_03288 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03288___pbuX.1.9828.seq
#    -bsequence pep-align/RBAM_020250___pbuX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03288___pbuX-RBAM_020250___pbuX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03288___pbuX-RBAM_020250___pbuX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03288___pbuX
# 2: RBAM_020250___pbuX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity:     357/443 (80.6%)
# Similarity:   396/443 (89.4%)
# Gaps:          14/443 ( 3.2%)
# Score: 1819.0
# 
#
#=======================================

BSNT_03288___      1 MRNGFGKTLSLGIQHVLAMYAGAIVVPLIVGKAMGLTVEQLTYLVSIDIF     50
                     |:||:.|||||||||||||||||:|||||||.|:||..||||||||||||
RBAM_020250__      1 MKNGYAKTLSLGIQHVLAMYAGAVVVPLIVGAALGLNAEQLTYLVSIDIF     50

BSNT_03288___     51 MCGVATLLQVWSNRFFGIGLPVVLGCTFTAVSPMIAIGSEYGVSTVYGSI    100
                     |||.|||||||.|:.||||||||||||||||:|:|:||.|||:|.:||||
RBAM_020250__     51 MCGAATLLQVWRNKCFGIGLPVVLGCTFTAVAPIISIGKEYGISAIYGSI    100

BSNT_03288___    101 IASGILVILISFFFGKLVSFFPPVVTGSVVTIIGITLMPVAMNNMAGGEG    150
                     :|||:||||:||||||||||||||||||||||||:||||||||::|||||
RBAM_020250__    101 LASGLLVILLSFFFGKLVSFFPPVVTGSVVTIIGMTLMPVAMNHIAGGEG    150

BSNT_03288___    151 SADFGDLSNLVLAFTVLSIIVLLYRFTKGFIKSVSILIGILIGTFIAYFM    200
                     |.||||.:||.|.||||.||||||||||||:||:||||||:|||.|||||
RBAM_020250__    151 SKDFGDPANLALGFTVLVIIVLLYRFTKGFLKSISILIGIVIGTAIAYFM    200

BSNT_03288___    201 GKVQFDNVSDAAVVQMIQPFYFGAPSFHAAPIITMSIVAIVSLVESTGVY    250
                     ||||||||::|..:|||:|||||.|:||||||||||||||||||||||||
RBAM_020250__    201 GKVQFDNVANADAIQMIKPFYFGTPTFHAAPIITMSIVAIVSLVESTGVY    250

BSNT_03288___    251 FALGDLTNRRLTEKDLSKGYRAEGLAVLLGGIFNAFPYTAFSQNVGLVQL    300
                     |||||||||||:|:||:||||||||||.:.||||||||||:|||||||||
RBAM_020250__    251 FALGDLTNRRLSERDLAKGYRAEGLAVFISGIFNAFPYTAYSQNVGLVQL    300

BSNT_03288___    301 TGIKKNTVIVVTGVILMAFGLFPKIAAFTTIIPSAVLGGAMVAMFGMVIA    350
                     ||||||.||.|||.:||.||||||||||||||||:||||||||||||||:
RBAM_020250__    301 TGIKKNAVIGVTGALLMLFGLFPKIAAFTTIIPSSVLGGAMVAMFGMVIS    350

BSNT_03288___    351 YGIKMLSRIDFAKQENLLIVACSVGLGLGVTVVPDIFKQLPSALTLLTTN    400
                     |||||||:|||.|||||||||||||||||||||||:||.|||.|.|||||
RBAM_020250__    351 YGIKMLSQIDFKKQENLLIVACSVGLGLGVTVVPDMFKHLPSYLNLLTTN    400

BSNT_03288___    401 GIVAGSFTAVVLNIVYNVFSKAKKS-----EQEADLAEQKTAV    438
                     ||||||||||:|||:||:..|.||:     .||.         
RBAM_020250__    401 GIVAGSFTAVLLNIIYNMIPKTKKTLDVTRVQEG---------    434


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