Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03288 and RBAM_020250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence pep-align/BSNT_03288___pbuX.1.9828.seq
# -bsequence pep-align/RBAM_020250___pbuX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03288___pbuX-RBAM_020250___pbuX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03288___pbuX-RBAM_020250___pbuX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03288___pbuX
# 2: RBAM_020250___pbuX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 357/443 (80.6%)
# Similarity: 396/443 (89.4%)
# Gaps: 14/443 ( 3.2%)
# Score: 1819.0
#
#
#=======================================
BSNT_03288___ 1 MRNGFGKTLSLGIQHVLAMYAGAIVVPLIVGKAMGLTVEQLTYLVSIDIF 50
|:||:.|||||||||||||||||:|||||||.|:||..||||||||||||
RBAM_020250__ 1 MKNGYAKTLSLGIQHVLAMYAGAVVVPLIVGAALGLNAEQLTYLVSIDIF 50
BSNT_03288___ 51 MCGVATLLQVWSNRFFGIGLPVVLGCTFTAVSPMIAIGSEYGVSTVYGSI 100
|||.|||||||.|:.||||||||||||||||:|:|:||.|||:|.:||||
RBAM_020250__ 51 MCGAATLLQVWRNKCFGIGLPVVLGCTFTAVAPIISIGKEYGISAIYGSI 100
BSNT_03288___ 101 IASGILVILISFFFGKLVSFFPPVVTGSVVTIIGITLMPVAMNNMAGGEG 150
:|||:||||:||||||||||||||||||||||||:||||||||::|||||
RBAM_020250__ 101 LASGLLVILLSFFFGKLVSFFPPVVTGSVVTIIGMTLMPVAMNHIAGGEG 150
BSNT_03288___ 151 SADFGDLSNLVLAFTVLSIIVLLYRFTKGFIKSVSILIGILIGTFIAYFM 200
|.||||.:||.|.||||.||||||||||||:||:||||||:|||.|||||
RBAM_020250__ 151 SKDFGDPANLALGFTVLVIIVLLYRFTKGFLKSISILIGIVIGTAIAYFM 200
BSNT_03288___ 201 GKVQFDNVSDAAVVQMIQPFYFGAPSFHAAPIITMSIVAIVSLVESTGVY 250
||||||||::|..:|||:|||||.|:||||||||||||||||||||||||
RBAM_020250__ 201 GKVQFDNVANADAIQMIKPFYFGTPTFHAAPIITMSIVAIVSLVESTGVY 250
BSNT_03288___ 251 FALGDLTNRRLTEKDLSKGYRAEGLAVLLGGIFNAFPYTAFSQNVGLVQL 300
|||||||||||:|:||:||||||||||.:.||||||||||:|||||||||
RBAM_020250__ 251 FALGDLTNRRLSERDLAKGYRAEGLAVFISGIFNAFPYTAYSQNVGLVQL 300
BSNT_03288___ 301 TGIKKNTVIVVTGVILMAFGLFPKIAAFTTIIPSAVLGGAMVAMFGMVIA 350
||||||.||.|||.:||.||||||||||||||||:||||||||||||||:
RBAM_020250__ 301 TGIKKNAVIGVTGALLMLFGLFPKIAAFTTIIPSSVLGGAMVAMFGMVIS 350
BSNT_03288___ 351 YGIKMLSRIDFAKQENLLIVACSVGLGLGVTVVPDIFKQLPSALTLLTTN 400
|||||||:|||.|||||||||||||||||||||||:||.|||.|.|||||
RBAM_020250__ 351 YGIKMLSQIDFKKQENLLIVACSVGLGLGVTVVPDMFKHLPSYLNLLTTN 400
BSNT_03288___ 401 GIVAGSFTAVVLNIVYNVFSKAKKS-----EQEADLAEQKTAV 438
||||||||||:|||:||:..|.||: .||.
RBAM_020250__ 401 GIVAGSFTAVLLNIIYNMIPKTKKTLDVTRVQEG--------- 434
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