Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03885 and RBAM_020240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_03885___yrdC.1.9828.seq
# -bsequence pep-align/RBAM_020240___yrdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03885___yrdC-RBAM_020240___yrdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03885___yrdC-RBAM_020240___yrdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03885___yrdC
# 2: RBAM_020240___yrdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 176/188 (93.6%)
# Similarity: 181/188 (96.3%)
# Gaps: 0/188 ( 0.0%)
# Score: 908.0
#
#
#=======================================
BSNT_03885___ 1 MEEKKKALIIVDVQKAFDDKKWGERNNVKAEENISKILKLWREKGWTVIY 50
|.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020240__ 1 MAEKKKALIIVDVQKAFDDKKWGERNNVKAEENISKILKLWREKGWTVIY 50
BSNT_03885___ 51 IQHTSDKPHSLFHPKNEGFAIKEIVKPMDEEVIITKTVNSSFIGTNLEEF 100
||||||||.|||:|||||.|||||||||::||||||.||||||||||||.
RBAM_020240__ 51 IQHTSDKPGSLFYPKNEGVAIKEIVKPMEKEVIITKKVNSSFIGTNLEEL 100
BSNT_03885___ 101 LKLNEITTVVITGLTTPHCVSTTTRMSGNLGFDTYLISDATAAFGMRDQN 150
||.|:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_020240__ 101 LKANDITTVVITGLTTPHCVSTTTRMSGNLGFDTYLISDATAAFGMRDQN 150
BSNT_03885___ 151 DTYYDAATIHNISLATLHDEFATILTTDQLINDFIKTH 188
||||||.||||||||||||||||||||||||||||||:
RBAM_020240__ 151 DTYYDAETIHNISLATLHDEFATILTTDQLINDFIKTN 188
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