Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03287 and RBAM_020200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence pep-align/BSNT_03287___bcsA.1.9828.seq
# -bsequence pep-align/RBAM_020200___bcsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03287___bcsA-RBAM_020200___bcsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03287___bcsA-RBAM_020200___bcsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03287___bcsA
# 2: RBAM_020200___bcsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 248/366 (67.8%)
# Similarity: 301/366 (82.2%)
# Gaps: 1/366 ( 0.3%)
# Score: 1320.0
#
#
#=======================================
BSNT_03287___ 1 MAFILSIGTSLPAYNVNQEKAAEFARYMFQHSFKDIDRLLSSFKNGQIHS 50
||::||:|||:|.|:|:||.||:|||.||..|||||||||.:|:||:|.|
RBAM_020200__ 1 MAYVLSVGTSIPKYHVSQETAADFARGMFADSFKDIDRLLKAFQNGEIES 50
BSNT_03287___ 51 RQFVKPIEWYKEGHSFEEKNQIYIEETLKHSRAAVRECLSHPEFFQEAIP 100
||||:||||||....|.|||::|.|||:|||..|..:||::|:......|
RBAM_020200__ 51 RQFVRPIEWYKTARGFSEKNRLYTEETVKHSADAALDCLTNPDCLTNPFP 100
BSNT_03287___ 101 YEKVEAVFFVSSTGLFTPSIEARLMNELPFSPYTKRIPIWGLGCAGGASG 150
||||:|:||:|||||.||||||::||:||||..|||||||||||||||:|
RBAM_020200__ 101 YEKVDAIFFISSTGLSTPSIEAKVMNQLPFSAKTKRIPIWGLGCAGGAAG 150
BSNT_03287___ 151 LARAAEYCKAYPTAFVLVIAAELCSLTFQPEDKTKSNLIGTSLFGDGIAA 200
|:||.|||:|||.|:|||||||||||||||.||:||||||||||.|||||
RBAM_020200__ 151 LSRAYEYCRAYPEAYVLVIAAELCSLTFQPNDKSKSNLIGTSLFADGIAA 200
BSNT_03287___ 201 ALLCGEKADRRMSKLQLAPKIMDAQSVLMKQSEDVMGWDFTDQGFKVIFS 250
.|:.||||:|...|..|.|:|...|||:|..:||||||:|||.||:||||
RBAM_020200__ 201 VLIGGEKANRNDVKQPLLPRIFATQSVMMPDAEDVMGWEFTDSGFQVIFS 250
BSNT_03287___ 251 RDIPTLVEKWLKTNVQIFLDKHKLSFHDISVFLAHPGGKKVIDAYIKSLG 300
|||||||.:|||.||..||..:.:|.|||..||||||||||||||:.||.
RBAM_020200__ 251 RDIPTLVSQWLKDNVDEFLFAYGISPHDIKTFLAHPGGKKVIDAYLTSLS 300
BSNT_03287___ 301 LSSEKLSSAQSILQKHGNMSSATILYVIKDHLQNGHKKEAERGLIGALGP 350
:.:.:|::::.:||||||||||||.:|||:.|.:|.:||.|:||||||||
RBAM_020200__ 301 MDTGQLAASRKVLQKHGNMSSATIFHVIKEQLLHGRQKENEKGLIGALGP 350
BSNT_03287___ 351 GFSSELLLFSWEKGA- 365
|||||||||||||||
RBAM_020200__ 351 GFSSELLLFSWEKGAS 366
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