Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03286 and RBAM_020190

See DNA alignment / Visit BSNT_03286 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03286___ypbQ.1.9828.seq
#    -bsequence pep-align/RBAM_020190___ypbQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03286___ypbQ-RBAM_020190___ypbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03286___ypbQ-RBAM_020190___ypbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03286___ypbQ
# 2: RBAM_020190___ypbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     110/168 (65.5%)
# Similarity:   131/168 (78.0%)
# Gaps:           0/168 ( 0.0%)
# Score: 588.0
# 
#
#=======================================

BSNT_03286___      1 MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILF     50
                     ||||.|.:|..||.|||.|||:||||||||||:|:||.|||:::.||:||
RBAM_020190__      1 MFWLFIMLLAAQRIAEMIVARRNEQKVKKQGAVEYGEGHYPFLVLMHVLF     50

BSNT_03286___     51 FLSLIAEVLLMNKQPSSWWLGIAAVILSAQIVRYWALCSLGAYWNTKILV    100
                     |:||.|||....|..|..|..|..:||..|.:|||||.|||.||||||||
RBAM_020190__     51 FVSLTAEVAAFQKTLSPRWAAIICIILFVQGIRYWALLSLGRYWNTKILV    100

BSNT_03286___    101 VPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAVL    150
                     ||..|||:||||:|||||||||||||.:.:||||.||.|:.||||.||.:
RBAM_020190__    101 VPDAELVRKGPYRWMKHPNYAVVILEFIFLPLLYGAYWTLFLFSILNACM    150

BSNT_03286___    151 LSVRIRAEDKALQEYSVK    168
                     |:||||||:|||:|.:.|
RBAM_020190__    151 LTVRIRAEEKALEENTAK    168


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