Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03277 and RBAM_020130

See DNA alignment / Visit BSNT_03277 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence pep-align/BSNT_03277___ypdQ.1.9828.seq
#    -bsequence pep-align/RBAM_020130___ypdQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03277___ypdQ-RBAM_020130___ypdQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03277___ypdQ-RBAM_020130___ypdQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03277___ypdQ
# 2: RBAM_020130___ypdQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:     108/133 (81.2%)
# Similarity:   118/133 (88.7%)
# Gaps:           3/133 ( 2.3%)
# Score: 564.0
# 
#
#=======================================

BSNT_03277___      1 -MPTEIYVDGASAGNPGPSGIGIFIKHEGIAESFSIPIGVHTNQEAEFLA     49
                      ||.|||||||||||||||||||||||:|..||||||||.|:||||||||
RBAM_020130__      1 MMPAEIYVDGASAGNPGPSGIGIFIKHDGKTESFSIPIGDHSNQEAEFLA     50

BSNT_03277___     50 LIEGMKLCATRGYQSVSFRTDSDIVERATELEMVKNKTFQPFVEEITRLK     99
                     |||||||||.||::||||||||||||||.:||.||||.|||||:||.:||
RBAM_020130__     51 LIEGMKLCAARGFESVSFRTDSDIVERAADLEAVKNKAFQPFVDEIIQLK    100

BSNT_03277___    100 AAFPLFFIKWIPGKQNQKADLLAKEAIRLNEKN    132
                     |.|||||||||||:|||.||.|||:|||||:  
RBAM_020130__    101 AGFPLFFIKWIPGRQNQTADQLAKKAIRLNK--    131


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