Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03277 and RBAM_020130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03277___ypdQ.1.9828.seq
# -bsequence dna-align/RBAM_020130___ypdQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03277___ypdQ-RBAM_020130___ypdQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03277___ypdQ-RBAM_020130___ypdQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03277___ypdQ
# 2: RBAM_020130___ypdQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 313/403 (77.7%)
# Similarity: 313/403 (77.7%)
# Gaps: 11/403 ( 2.7%)
# Score: 1218.5
#
#
#=======================================
BSNT_03277___ 1 ---ATGCCTACAGAAATATACGTAGACGGCGCAAGCGCTGGTAATCCCGG 47
|||||..|.|||||.||.||||||||.||||||||.||.||.||.||
RBAM_020130__ 1 ATGATGCCCGCTGAAATTTATGTAGACGGTGCAAGCGCCGGAAACCCGGG 50
BSNT_03277___ 48 CCCTTCCGGTATCGGCATTTTTATCAAACATGA-GGGAATAGCAGAATCC 96
|||.|||||||||||.||||||||.|||||||| ||||| |.|||||||.
RBAM_020130__ 51 CCCGTCCGGTATCGGTATTTTTATTAAACATGACGGGAA-AACAGAATCT 99
BSNT_03277___ 97 TTCTCTATTCCAATCGGAGTGCATACAAATCAGGAAGCGGAATTTCTTGC 146
|||||.|||||.|||||.|..|||.|||||||||||||.||||||||.||
RBAM_020130__ 100 TTCTCAATTCCGATCGGCGACCATTCAAATCAGGAAGCTGAATTTCTCGC 149
BSNT_03277___ 147 ATTAATTGAAGGGATGAAGCTATGTGCAACGCGCGGGTATCAATCGGTTT 196
.|||||||||||.||||||||.|||||..|.|||||.|.|.|.||.||.|
RBAM_020130__ 150 TTTAATTGAAGGAATGAAGCTGTGTGCCGCCCGCGGATTTGAGTCCGTGT 199
BSNT_03277___ 197 CCTTTCGAACCGATTCAGATATTGTGGAACGCGCCACTGAGCTTGAAATG 246
|.||.||.||.|||||.|||||.|||||.||.|||.|.||.||||||..|
RBAM_020130__ 200 CATTCCGGACGGATTCGGATATCGTGGAGCGGGCCGCAGATCTTGAAGCG 249
BSNT_03277___ 247 GTTAAAAATAAAACGTTTCAACCGTTCGTAGAAGAAATCACCCGATTAAA 296
||||||||.||..|.||.||.|||||.||.||.|||||||.||..|||||
RBAM_020130__ 250 GTTAAAAACAAGGCTTTCCAGCCGTTTGTGGACGAAATCATCCAGTTAAA 299
BSNT_03277___ 297 AGCGGCATTCCCTCTTTTTTTCATCAAATGGATACCGGGCAAGCAAAACC 346
.||.|.|||.||..|.||||||||.||.|||||.||.||||..|||||||
RBAM_020130__ 300 GGCCGGATTTCCATTGTTTTTCATTAAGTGGATTCCCGGCAGACAAAACC 349
BSNT_03277___ 347 AAAAAGCCGATCTTCTGGCAAAAGAAGCGATTCGGCTGAATGAAAAGAAT 396
|||.||||||||..||.||||||.||||||||||||||||| |||.||
RBAM_020130__ 350 AAACAGCCGATCAGCTCGCAAAAAAAGCGATTCGGCTGAAT--AAATAA- 396
BSNT_03277___ 397 TAA 399
RBAM_020130__ 396 --- 396
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