Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03276 and RBAM_020120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence pep-align/BSNT_03276___ypdP.1.9828.seq
# -bsequence pep-align/RBAM_020120___ypdP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03276___ypdP-RBAM_020120___ypdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03276___ypdP-RBAM_020120___ypdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03276___ypdP
# 2: RBAM_020120___ypdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 193/229 (84.3%)
# Similarity: 208/229 (90.8%)
# Gaps: 3/229 ( 1.3%)
# Score: 1011.0
#
#
#=======================================
BSNT_03276___ 1 MFNNSFWIFFAIIHFIIVLLFYKGFGKMGLFVWIGFATVCANLQVVKTVE 50
|||:..||.||:|||||||||||||||.||||||||||||||||||||||
RBAM_020120__ 1 MFNDVLWILFAVIHFIIVLLFYKGFGKTGLFVWIGFATVCANLQVVKTVE 50
BSNT_03276___ 51 LFGLTATLGNVMYGTIFFATDVLNEKYGPAEARKAVWLGFSTLLTLTFVM 100
||||||||||:||||:|||||||||||||.||||||||||||||.||..|
RBAM_020120__ 51 LFGLTATLGNIMYGTVFFATDVLNEKYGPREARKAVWLGFSTLLALTCAM 100
BSNT_03276___ 101 QGVLLFEPASSDISQTALETIFGFLPRVALGSLLAFIFSQTLDVYVYSAI 150
||.||::||:|||:|.|||||||||||||||||||||||||:||||||||
RBAM_020120__ 101 QGALLYKPAASDIAQPALETIFGFLPRVALGSLLAFIFSQTIDVYVYSAI 150
BSNT_03276___ 151 RRIFPSDRLLWLRNGGSTAVSQLFDTFIFTSVAFLGIYPAGVWLHIFIST 200
||||||||||||||.||||:|||.||||||:|||:|:|.||||..|||||
RBAM_020120__ 151 RRIFPSDRLLWLRNSGSTALSQLLDTFIFTAVAFIGVYSAGVWFSIFIST 200
BSNT_03276___ 201 YLIKFAVSLISLPYAYAAKKMIPKDERSS 229
|||||||||||:|||||||:|.|..|
RBAM_020120__ 201 YLIKFAVSLISVPYAYAAKRMTPNGE--- 226
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