Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03272 and RBAM_020090

See DNA alignment / Visit BSNT_03272 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence pep-align/BSNT_03272___ypzA.1.9828.seq
#    -bsequence pep-align/RBAM_020090___ypzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03272___ypzA-RBAM_020090___ypzA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03272___ypzA-RBAM_020090___ypzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03272___ypzA
# 2: RBAM_020090___ypzA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      60/89 (67.4%)
# Similarity:    72/89 (80.9%)
# Gaps:           4/89 ( 4.5%)
# Score: 283.0
# 
#
#=======================================

BSNT_03272___      1 MTSEFHNEDQTGFTDKRQLELAVETAQKTTGAATRGQSKTLVDSAYQAIE     50
                     |.|||.   ..|.||||||||||||||||||||||.|:.|||:||||||:
RBAM_020090__      1 MDSEFF---PNGLTDKRQLELAVETAQKTTGAATRSQNSTLVESAYQAIQ     47

BSNT_03272___     51 DARELSQSEELAALDDPEFVKQQQQLLDDSEHQLDEFKE     89
                     |||.:|||.||.|||. :|:::|:.||||.:||||||::
RBAM_020090__     48 DARTMSQSSELQALDQ-DFLQKQRMLLDDCQHQLDEFEK     85


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