Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03271 and RBAM_020080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence pep-align/BSNT_03271___degR.1.9828.seq
# -bsequence pep-align/RBAM_020080___degR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03271___degR-RBAM_020080___degR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03271___degR-RBAM_020080___degR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03271___degR
# 2: RBAM_020080___degR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity: 43/60 (71.7%)
# Similarity: 50/60 (83.3%)
# Gaps: 0/60 ( 0.0%)
# Score: 216.0
#
#
#=======================================
BSNT_03271___ 1 MDDKDLKLILHKTFIEIYSDLEELADIAKKGKPSMEKYVEEIEQRCKQNI 50
|:|||||.||.:||.|||.||..||::||||.|||||.:||||||||||:
RBAM_020080__ 1 MNDKDLKTILQQTFKEIYGDLGSLAEMAKKGMPSMEKQIEEIEQRCKQNL 50
BSNT_03271___ 51 LAIEIQMKIK 60
:|||||..||
RBAM_020080__ 51 VAIEIQTAIK 60
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