Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03271 and RBAM_020080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03271___degR.1.9828.seq
# -bsequence dna-align/RBAM_020080___degR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03271___degR-RBAM_020080___degR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03271___degR-RBAM_020080___degR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03271___degR
# 2: RBAM_020080___degR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 135/185 (73.0%)
# Similarity: 135/185 (73.0%)
# Gaps: 4/185 ( 2.2%)
# Score: 470.0
#
#
#=======================================
BSNT_03271___ 1 ATGGATGATAAAGACTTGAAGTTGATCCTTCACAAAACATTTATAGAAAT 50
.||.||||||||||.||.||....||||||||..|.|||||||.|||.||
RBAM_020080__ 1 GTGAATGATAAAGATTTAAAAACAATCCTTCAGCAGACATTTAAAGAGAT 50
BSNT_03271___ 51 ATACAGTGATTTAGAAGAA--CTGGCGGATATCGCGAAAAAAGGAAAACC 98
||||.|||||||.| ||| .|.|||||.||.||.||||||||||..||
RBAM_020080__ 51 ATACGGTGATTTGG--GAAGTTTAGCGGAAATGGCAAAAAAAGGAATGCC 98
BSNT_03271___ 99 ATCAATGGAAAAGTATGTTGAAGAGATTGAACAGAGGTGTAAACAAAACA 148
.||||||||.||..|..|||||||.||.||.|||.|.||.||.||.||..
RBAM_020080__ 99 GTCAATGGAGAAACAAATTGAAGAAATCGAGCAGCGCTGCAAGCAGAATC 148
BSNT_03271___ 149 TTTTGGCGATTGAAATCCAGATGAAAATCAAATAG 183
||.|.||.|||||.||.||||.|..||||||||||
RBAM_020080__ 149 TTGTCGCAATTGAGATTCAGACGGCAATCAAATAG 183
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