Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03266 and RBAM_020040

See DNA alignment / Visit BSNT_03266 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence pep-align/BSNT_03266___bsaA.1.9828.seq
#    -bsequence pep-align/RBAM_020040___bsaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03266___bsaA-RBAM_020040___bsaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03266___bsaA-RBAM_020040___bsaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03266___bsaA
# 2: RBAM_020040___bsaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:     123/162 (75.9%)
# Similarity:   141/162 (87.0%)
# Gaps:           2/162 ( 1.2%)
# Score: 678.0
# 
#
#=======================================

BSNT_03266___      1 MSIYHMKVRTITGKDMTLQPFAGKVLMIVNTASKCGFTPQLKQLQELYDT     50
                     |:||.:.||||||:||||..:.|||::|||||||||||.|||||||||||
RBAM_020040__      1 MTIYDINVRTITGEDMTLSAYRGKVMIIVNTASKCGFTSQLKQLQELYDT     50

BSNT_03266___     51 YQQEGLEILGFPCNQFMNQEPDEEADIQEFCETNYGVTFPMFSKVDVNGK    100
                     |::||||||||||||||||||..||:|||||..|||||||||:||||||.
RBAM_020040__     51 YREEGLEILGFPCNQFMNQEPGNEAEIQEFCVKNYGVTFPMFAKVDVNGA    100

BSNT_03266___    101 NAHPLFVYLTEHAKGMLGTKAIKWNFTKFIVDRNGEIVGRYSPNTNPKEL    150
                     :|||||.||||.|||||||||:|||||||||||||::.||:|||.|||||
RBAM_020040__    101 DAHPLFTYLTEQAKGMLGTKAVKWNFTKFIVDRNGKVTGRFSPNVNPKEL    150

BSNT_03266___    151 ENDIVKLLEQ--    160
                     |:.:.:||..  
RBAM_020040__    151 EDTVQRLLADKR    162


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