Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03266 and RBAM_020040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_03266___bsaA.1.9828.seq
# -bsequence dna-align/RBAM_020040___bsaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03266___bsaA-RBAM_020040___bsaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03266___bsaA-RBAM_020040___bsaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03266___bsaA
# 2: RBAM_020040___bsaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 496
# Identity: 358/496 (72.2%)
# Similarity: 358/496 (72.2%)
# Gaps: 20/496 ( 4.0%)
# Score: 1245.0
#
#
#=======================================
BSNT_03266___ 1 ATGTCTATTTATCATATGAAGGTACGTACAATCACAGGGAAAGACATGAC 50
|||.|.|||||..||||.||.|||||.||.||.|||||..||||||||||
RBAM_020040__ 1 ATGACAATTTACGATATAAACGTACGGACCATAACAGGCGAAGACATGAC 50
BSNT_03266___ 51 ACT-TCAGCCTTTCGCGGGAAAGGTACTGATGATCGTGAATACAGCAAGT 99
.|| || |.|||.|...||.|||||..||||.||.||||||||||||||.
RBAM_020040__ 51 GCTATC-GGCTTACAGAGGCAAGGTGATGATCATTGTGAATACAGCAAGC 99
BSNT_03266___ 100 AAGTGCGGTTTTACTCCCCAATTAAAGCAGCTGCAGGAATTATATGATAC 149
||.|||||.||.||..||||..|.||||||||.|||||..|.||||||||
RBAM_020040__ 100 AAATGCGGATTCACATCCCAGCTCAAGCAGCTTCAGGAGCTCTATGATAC 149
BSNT_03266___ 150 ATATCAGCAGGAGGGGCTGGAGATCTTAGGGTTTCCCTGCAATCAATTCA 199
|||||.|.||||.||.||.||.||.||.||.|||||||||||.|||||||
RBAM_020040__ 150 ATATCGGGAGGAAGGTCTTGAAATATTGGGATTTCCCTGCAACCAATTCA 199
BSNT_03266___ 200 TGAACCAAGAGCCTGATGAA--GAGGCTGACATACAGGAATTTTGTGAAA 247
||||||||||.|||| ||| ||.||.||.||.||.||.||.||||..|
RBAM_020040__ 200 TGAACCAAGAACCTG--GAAACGAAGCGGAAATTCAAGAGTTCTGTGTGA 247
BSNT_03266___ 248 CAAATTACGGTGTTACATTTCCTATGTTTTCAAAAGTGGATGTAAACGGG 297
.|||.|||||.||.|||||.||.||||||.|.|||||.|||||.||.||.
RBAM_020040__ 248 AAAACTACGGAGTCACATTCCCGATGTTTGCGAAAGTTGATGTCAATGGA 297
BSNT_03266___ 298 AAAAATGCCCACCCGCTGTTTGTGTATTTGACAGAACATGCGAAAGGGAT 347
..|.|.||.||.||.||.||....|||.||||.|||||.|||||.|||||
RBAM_020040__ 298 GCAGACGCTCATCCTCTCTTCACATATCTGACGGAACAGGCGAAGGGGAT 347
BSNT_03266___ 348 GCTGGGAACTAAGGCGATCAAGTGGAATTTCACGAAATTTATAGTGGATA 397
|||.||.||.||.|||.||||.|||||||||||.||.|||||.|||||..
RBAM_020040__ 348 GCTCGGCACAAAAGCGGTCAAATGGAATTTCACTAAGTTTATCGTGGACC 397
BSNT_03266___ 398 GAAATGGAGAAATCGTTGGCCGTTATTCACCAAATACAAATCCGAAAGAG 447
||||.||..||.||...||.||||.||||||.||....||.||.||||||
RBAM_020040__ 398 GAAACGGTAAAGTCACCGGGCGTTTTTCACCGAACGTCAACCCAAAAGAG 447
BSNT_03266___ 448 CTGGAAAACGATATCGT---GAAGCTATTAGAGCAATAA------- 483
||.||| ||||..|| ||.||| ||.|..|.||||
RBAM_020040__ 448 CTTGAA---GATACGGTACAGAGGCT-TTTGGCCGATAAGAGGTGA 489
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