Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03258 and RBAM_020010

See DNA alignment / Visit BSNT_03258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03258___ilvD.1.9828.seq
#    -bsequence pep-align/RBAM_020010___ilvD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03258___ilvD-RBAM_020010___ilvD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03258___ilvD-RBAM_020010___ilvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03258___ilvD
# 2: RBAM_020010___ilvD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     543/558 (97.3%)
# Similarity:   553/558 (99.1%)
# Gaps:           0/558 ( 0.0%)
# Score: 2806.0
# 
#
#=======================================

BSNT_03258___      1 MAELRSNMITQGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGH     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020010__      1 MAELRSNMITQGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGH     50

BSNT_03258___     51 VHLQEFGKIVKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREII    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020010__     51 VHLQEFGKIVKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREII    100

BSNT_03258___    101 ADSVETVVSAHWFDGMVCIPNCDKITPGMLMAAMRINIPTIFVSGGPMAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020010__    101 ADSVETVVSAHWFDGMVCIPNCDKITPGMLMAAMRINIPTIFVSGGPMAA    150

BSNT_03258___    151 GRTSDGRKISLSSVFEGVGAYQAGKINENELQELEQFGCPTCGSCSGMFT    200
                     ||||||||||||||||||||||||||.|::||||||||||||||||||||
RBAM_020010__    151 GRTSDGRKISLSSVFEGVGAYQAGKIGESDLQELEQFGCPTCGSCSGMFT    200

BSNT_03258___    201 ANSMNCLSEALGLALPGNGTILATSPERKEFVRKSAAQLMETIRKDIKPR    250
                     ||||||||||||||||||||||||||||:||||||||||||||:||||||
RBAM_020010__    201 ANSMNCLSEALGLALPGNGTILATSPERREFVRKSAAQLMETIKKDIKPR    250

BSNT_03258___    251 DIVTVKAIDNAFALDMALGGSTNTVLHTLALANEAGVEYSLERINEVAER    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_020010__    251 DIVTEKAIDNAFALDMALGGSTNTVLHTLALANEAGVEYSLERINEVAER    300

BSNT_03258___    301 VPHLAKLAPASDVFIEDLHEAGGVSAALNELSKKEGALHLDALTVTGKTL    350
                     ||||:||||||||||||||||||||||||||:|||||||||||||||:||
RBAM_020010__    301 VPHLSKLAPASDVFIEDLHEAGGVSAALNELAKKEGALHLDALTVTGRTL    350

BSNT_03258___    351 GETIAGHEVKDYDVIHPLDQPFTEKGGLAVLFGNLAPDGAIIKTGGVQNG    400
                     |||||||||||||||||||.||||||||||||||||||||||||||||:|
RBAM_020010__    351 GETIAGHEVKDYDVIHPLDNPFTEKGGLAVLFGNLAPDGAIIKTGGVQDG    400

BSNT_03258___    401 ITRHEGPAVVFDSQDEALDGIINRKVKEGDVVIIRYEGPKGGPGMPEMLA    450
                     |||||||||||||||.||:|||||||||||||||||||||||||||||||
RBAM_020010__    401 ITRHEGPAVVFDSQDAALEGIINRKVKEGDVVIIRYEGPKGGPGMPEMLA    450

BSNT_03258___    451 PTSQIVGMGLGPKVALITDGRFSGASRGLSIGHVSPEAAEGGPLAFVENG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020010__    451 PTSQIVGMGLGPKVALITDGRFSGASRGLSIGHVSPEAAEGGPLAFVENG    500

BSNT_03258___    501 DHIIVDIEKRILDVQVPEEEWEKRKANWKGFEPKVKTGYLARYSKLVTSA    550
                     ||:|||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_020010__    501 DHVIVDIEKRILDVQVPEEEWEKRKAEWKGFEPKVKTGYLARYSKLVTSA    550

BSNT_03258___    551 NTGGIMKI    558
                     ||||||||
RBAM_020010__    551 NTGGIMKI    558


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