Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03256 and RBAM_019990

See DNA alignment / Visit BSNT_03256 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03256.1.9828.seq
#    -bsequence pep-align/RBAM_019990___ypiP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03256-RBAM_019990___ypiP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03256-RBAM_019990___ypiP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03256
# 2: RBAM_019990___ypiP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     183/257 (71.2%)
# Similarity:   219/257 (85.2%)
# Gaps:           1/257 ( 0.4%)
# Score: 980.0
# 
#
#=======================================

BSNT_03256         1 MITTSYRPSEHTIKTAKQLSKELNMPYCGRNKQTVEHLLKSAERDLLVVG     50
                     ||||||||||:||.||:.||.:|...||.||||.:|.:|:.|..||||:|
RBAM_019990__      1 MITTSYRPSEYTIHTAQSLSVKLGDTYCSRNKQPIEKMLERAASDLLVIG     50

BSNT_03256        51 KERFELYTKQGAKFFFHPNTAMFRAKRFLQGEQEPMLRAAGLSEGDAFLD    100
                     |||||||||||.|||||||||||||||||:||.||:|:||||.|||:|||
RBAM_019990__     51 KERFELYTKQGEKFFFHPNTAMFRAKRFLRGEAEPLLKAAGLREGDSFLD    100

BSNT_03256       101 CTLGLGSDAIIASMAVGETGSVVGIEKNHLVSVLVRMGLHSWETGIEELQ    150
                     |||||.||||:||:|||::|.|:|:|||.|||:||..||.:||||:|:||
RBAM_019990__    101 CTLGLASDAILASLAVGKSGQVIGLEKNKLVSLLVETGLQTWETGMEQLQ    150

BSNT_03256       151 AAMRRIQVKNGDCLEYIKQLPDNSVDVVYFDPMFHEPVETSDGIAPLRDL    200
                     .||:|||||:.||.:|:.:|||:||||:|||||||||||.||||||||.|
RBAM_019990__    151 TAMKRIQVKHADCADYLLELPDSSVDVIYFDPMFHEPVEMSDGIAPLRAL    200

BSNT_03256       201 AEDSVLHEGCINEAVRVARKSVVLKDHWKSPRFEQFGFNVMKRKTALFHY    250
                     ||:. .:|.||.:|||.|:|.|||||||||||||::||.|:||||||||:
RBAM_019990__    201 AEEG-FNEECITQAVRAAKKCVVLKDHWKSPRFERYGFKVLKRKTALFHF    249

BSNT_03256       251 GVIQTSP    257
                     |||..|.
RBAM_019990__    250 GVIHVSS    256


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