Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03255 and RBAM_019980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence pep-align/BSNT_03255___ypjP.1.9828.seq
# -bsequence pep-align/RBAM_019980___ypjP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03255___ypjP-RBAM_019980___ypjP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03255___ypjP-RBAM_019980___ypjP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03255___ypjP
# 2: RBAM_019980___ypjP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 168/203 (82.8%)
# Similarity: 181/203 (89.2%)
# Gaps: 3/203 ( 1.5%)
# Score: 899.0
#
#
#=======================================
BSNT_03255___ 1 --MWMRKTLVVLFTIVTFGLVSPPAALMADKPSGQPSSLEQNDYTAFYDE 48
:||:||||||||||||||||||||||.||||||.||||||||||||||
RBAM_019980__ 1 MKLWMKKTLVVLFTIVTFGLVSPPAALMTDKPSGQSSSLEQNDYTAFYDE 50
BSNT_03255___ 49 HDLYDDESDDRRDPELLFQSYKEQLLDSAEDQSFLKFGSRIAPVIEDDYR 98
|.|..:|... |:||||||||::|||..||:||||||||:|:||||||||
RBAM_019980__ 51 HALPGEEKAG-REPELLFQSYQQQLLGDAENQSFLKFGSKISPVIEDDYR 99
BSNT_03255___ 99 KEILPKIEKVISDYLATLQDDEAYQDVVISSMPSAGKTEKIFNVYNRTTG 148
.|||||||.||:.:||..|||||||||||||.||||||||||:||||.||
RBAM_019980__ 100 SEILPKIEDVITGHLAKFQDDEAYQDVVISSKPSAGKTEKIFHVYNRLTG 149
BSNT_03255___ 149 EDLLRFHVRRDHPPHDGYWFNFHYHTAEDGFQSHHELGSIYWDRNTPPNW 198
||||||||||||||.|||||||||||||||||||||||||||||||||:|
RBAM_019980__ 150 EDLLRFHVRRDHPPQDGYWFNFHYHTAEDGFQSHHELGSIYWDRNTPPDW 199
BSNT_03255___ 199 MSA 201
||.
RBAM_019980__ 200 MSV 202
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