Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03255 and RBAM_019980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03255___ypjP.1.9828.seq
# -bsequence dna-align/RBAM_019980___ypjP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03255___ypjP-RBAM_019980___ypjP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03255___ypjP-RBAM_019980___ypjP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03255___ypjP
# 2: RBAM_019980___ypjP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 486/621 (78.3%)
# Similarity: 486/621 (78.3%)
# Gaps: 27/621 ( 4.3%)
# Score: 1911.5
#
#
#=======================================
BSNT_03255___ 1 ------TTGTGGATGAGAAAGACCCTTGTGGTTTTATTTACCATTGTAAC 44
||||||||||.||||||||||||||||.|.||||||||||||||
RBAM_019980__ 1 ATGAAATTGTGGATGAAAAAGACCCTTGTGGTTCTGTTTACCATTGTAAC 50
BSNT_03255___ 45 GTTCGGGCTCGTATCTCCTCCGGCTGCCCTTATGGCGGACAAGCCTTCCG 94
||||||.|||||.||||||||||||||..|.|||.|.|||||||||||.|
RBAM_019980__ 51 GTTCGGACTCGTGTCTCCTCCGGCTGCTTTGATGACAGACAAGCCTTCAG 100
BSNT_03255___ 95 GACAGCCGAGCAGTCTTGAGCAGAATGATTACACCGCTTTTTATGATGAG 144
|||||.|||||||||||||||||||||||||||||||||||||||||||.
RBAM_019980__ 101 GACAGTCGAGCAGTCTTGAGCAGAATGATTACACCGCTTTTTATGATGAA 150
BSNT_03255___ 145 CATGACCT----GTACGATGATGAGTCGGATGACA-GGCGAGATCCTGAA 189
||.|.||| |.| ||.|| ||.|.|| ||||.||.||||||
RBAM_019980__ 151 CACGCCCTCCCGGGA----GAAGA----GAAGGCAGGGCGGGAGCCTGAA 192
BSNT_03255___ 190 CTGCTTTTTCAATCGTACAAGGAACAGCTCCT---TGACAGCGCTGAGGA 236
.|.||.|||||||||||..||.|.|||||.|| ||| .|||||..|
RBAM_019980__ 193 TTACTGTTTCAATCGTATCAGCAGCAGCTTCTCGGTGA---TGCTGAAAA 239
BSNT_03255___ 237 TCAGTCCTTTTTAAAATTCGGCAGCAGAATCGCTCCTGTCATTGAGGATG 286
|||.||.|||||||||||||||||||.||||.||||.||||||||.||||
RBAM_019980__ 240 TCAATCATTTTTAAAATTCGGCAGCAAAATCTCTCCGGTCATTGAAGATG 289
BSNT_03255___ 287 ACTATCGGAA-AGAGATCCTGCCAAAAATCGAAAAAGTGATTAGTGATTA 335
|||| |.||| .||.||.|||||.|||||||||.|.|||||.|..|...|
RBAM_019980__ 290 ACTA-CAGAAGTGAAATTCTGCCGAAAATCGAAGATGTGATCACAGGACA 338
BSNT_03255___ 336 TTTAGCGACATTGCAAGATGATGAGGCGTACCAAGATGTTGTGATCTCAA 385
||||||.|..||.|||||||||||.|||||.||.|||||.||.||.||.|
RBAM_019980__ 339 TTTAGCCAAGTTTCAAGATGATGAAGCGTATCAGGATGTGGTTATTTCCA 388
BSNT_03255___ 386 GCATGCCTTCAGCGGGCAAAACGGAAAAAATTTTCAACGTTTACAATCGG 435
|||..||.||.||.||.|||||.|||||||||||..|.||.||.||..||
RBAM_019980__ 389 GCAAACCGTCGGCCGGAAAAACTGAAAAAATTTTTCATGTGTATAACAGG 438
BSNT_03255___ 436 ACAACTGGAGAAGATCTTCTCAGATTCCATGTGCGAAGAGACCACCCGCC 485
...||.||.|||||||||.|.||.|||||.||.||..|.||.||.||.||
RBAM_019980__ 439 CTGACGGGTGAAGATCTTTTAAGGTTCCACGTCCGCCGGGATCATCCTCC 488
BSNT_03255___ 486 TCATGACGGCTACTGGTTTAATTTTCATTATCATACAGCAGAAGATGGAT 535
.||.||||||||||||||||||||||||||.|||||.||.|||||.||||
RBAM_019980__ 489 GCAAGACGGCTACTGGTTTAATTTTCATTACCATACCGCTGAAGACGGAT 538
BSNT_03255___ 536 TTCAATCACATCATGAGCTTGGGAGTATTTACTGGGACCGCAACACGCCT 585
|||||||||||||||||||.||.||.|||||||||||||||||.|||||.
RBAM_019980__ 539 TTCAATCACATCATGAGCTCGGCAGCATTTACTGGGACCGCAATACGCCG 588
BSNT_03255___ 586 CCCAACTGGATGAGTGCCTAA 606
||..||||||||||.|..|||
RBAM_019980__ 589 CCTGACTGGATGAGCGTGTAA 609
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