Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03249 and RBAM_019940

See DNA alignment / Visit BSNT_03249 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03249___yplQ.1.9828.seq
#    -bsequence pep-align/RBAM_019940___yplQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03249___yplQ-RBAM_019940___yplQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03249___yplQ-RBAM_019940___yplQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03249___yplQ
# 2: RBAM_019940___yplQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity:     177/213 (83.1%)
# Similarity:   196/213 (92.0%)
# Gaps:           1/213 ( 0.5%)
# Score: 963.0
# 
#
#=======================================

BSNT_03249___      1 MFTIKEEIANAITHGIGVLLSIPALVFLIIFAANYGSAWDIISFTIFGVS     50
                     |||||||||||:|||||||||||||:||||||..|||..||:||:|||.|
RBAM_019940__      1 MFTIKEEIANAVTHGIGVLLSIPALIFLIIFAVKYGSPTDIVSFSIFGAS     50

BSNT_03249___     51 MLLLYLSSTLLHSITHKKTKDILEIIDHSAIYVLIAGTYTPFLLGPLKGT    100
                     ||||||||||||||.||||||||||:|||||||||||||||||||||||.
RBAM_019940__     51 MLLLYLSSTLLHSIQHKKTKDILEIVDHSAIYVLIAGTYTPFLLGPLKGA    100

BSNT_03249___    101 LGFTLLVIVWSLALGGIVFKIFFVKRFILLSTFVYLVMGWLMIIAVKPLY    150
                     ||.|||:||||||:||||||||||||||:.||.|||:||||:|:|:||||
RBAM_019940__    101 LGLTLLIIVWSLAIGGIVFKIFFVKRFIIFSTLVYLMMGWLIIVAIKPLY    150

BSNT_03249___    151 VSLSGAGFSLLFLGGILYSVGTIFYIWKKIPFHHAIWHSFVLGGSAAMFF    200
                     .||||.||.||..||:|||.|||||||:|:|:||||||||||||||:|||
RBAM_019940__    151 ASLSGPGFGLLLFGGLLYSAGTIFYIWRKVPYHHAIWHSFVLGGSASMFF    200

BSNT_03249___    201 CVLFYCVKVPFLS    213
                     |:|||||||||: 
RBAM_019940__    201 CILFYCVKVPFI-    212


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